G1675556


Basic Information

Item Value
gene id G1675556
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 24082350 ~ 24083181 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1917043
GTCCAGGTGGAGGGTTCCGTTGTATTTGGGTTTGTTGACATCCAGGAACAGCTGAGGAGTCAGATTCTCCAACATGCCATCCTTCAACACATGGCGAGGTGGAAGACTCCTCCCACAGGCCCCAGCCTGCAGGCCTCGTTGATGAGTCGCTCCGCCCCCTCCAGGGTGCTGACATCACTGGTGGATACCAGCACCTGCACACCCATCCCCTGCCACTCACGCACGCGCTTCGCCTGGTAACGTTGCGGATGCCCGATCTGGAGGTGAGCACCAGTTTGCGGGCACCTCGCTCCGTCAGCCAATGAGCGAGCTCCAAGCCGAAGCCGCCCAGTCCCCCGGTGATGATGTAAGAGTGGGAAGCAGGGCAGAAGGTACGGCAGATGgcggggagggagaggggcgagCCCACCGCCTGAGTACCACCACCCTTCTCCTCTGAACGCACCTAGA

Function

NR:

description
fatty acid synthase-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1917043 True 450 lncRNA 0.62 3 24082350 24083181

Neighbor

gene id symbol gene type direction distance location
LOC110499226 gps1 coding upstream 53469 24020687 ~ 24090566 (+)
LOC110499218 rac3 coding upstream 104895 23972492 ~ 23977455 (+)
lrrc45 lrrc45 coding upstream 117892 23946660 ~ 23964458 (+)
prkar1ab prkar1a coding upstream 176535 23894637 ~ 23905815 (+)
LOC110499210 arsg coding upstream 194930 23870490 ~ 23887420 (+)
slc16a3 LOC106610249 coding downstream 62884 24146065 ~ 24169492 (+)
LOC118942055 NA coding downstream 100378 24183559 ~ 24189459 (+)
LOC110499595 NA coding downstream 546362 24629543 ~ 24632101 (+)
sdk2b sdk2 coding downstream 809749 24892930 ~ 25354425 (+)
cdc42ep4b cdc42ep4 coding downstream 1281634 25364815 ~ 25392592 (+)
G1675497 NA non-coding upstream 82419 23997052 ~ 23999931 (+)
G1675490 NA non-coding upstream 102263 23979883 ~ 23980087 (+)
G1675489 NA non-coding upstream 102724 23979411 ~ 23979626 (+)
G1675488 NA non-coding upstream 103820 23978308 ~ 23978530 (+)
G1675487 NA non-coding upstream 112479 23969348 ~ 23969871 (+)
G1675586 csnk1d non-coding downstream 95768 24178949 ~ 24179418 (+)
G1675585 csnk1d non-coding downstream 97178 24180359 ~ 24186488 (+)
G1675662 NA non-coding downstream 158186 24241367 ~ 24241730 (+)
G1676609 NA non-coding downstream 321271 24404452 ~ 24404811 (+)
G1676610 NA non-coding downstream 321763 24404944 ~ 24405223 (+)
faap100 faap100 other upstream 500918 23576429 ~ 23582556 (+)
LOC110499192 LOC106589579 other upstream 824281 23252800 ~ 23269058 (+)
LOC110513322 rsl1d1 other upstream 2122723 21936590 ~ 21959627 (+)
tnrc6b LOC106589538 other upstream 2236484 21806703 ~ 21848442 (+)
G1673231 LOC106589530 other upstream 2632004 21444883 ~ 21450346 (+)
G1677419 LOC100194703 other downstream 999483 25082664 ~ 25083277 (+)
G1677738 NA other downstream 1553510 25636691 ~ 25641614 (+)
G1678963 NA other downstream 2379013 26462194 ~ 26467953 (+)
LOC110499256 LOC106589642 other downstream 2548954 26632095 ~ 26639269 (+)
LOC110499259 LOC106589644 other downstream 2571446 26654584 ~ 26656111 (+)

Expression


Co-expression Network