Gene
RNA
| Item | Value |
|---|---|
| gene id | G1676609 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048584.1 |
| NCBI id | CM023238.2 |
| chromosome length | 46616863 |
| location | 24404452 ~ 24404811 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1918191 | True | 360 | lncRNA | 0.39 | 1 | 24404452 | 24404811 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118942055 | NA | coding | upstream | 214993 | 24183559 ~ 24189459 (+) |
| slc16a3 | LOC106610249 | coding | upstream | 234960 | 24146065 ~ 24169492 (+) |
| LOC110499226 | gps1 | coding | upstream | 375571 | 24020687 ~ 24090566 (+) |
| LOC110499218 | rac3 | coding | upstream | 426997 | 23972492 ~ 23977455 (+) |
| lrrc45 | lrrc45 | coding | upstream | 439994 | 23946660 ~ 23964458 (+) |
| LOC110499595 | NA | coding | downstream | 224732 | 24629543 ~ 24632101 (+) |
| sdk2b | sdk2 | coding | downstream | 488119 | 24892930 ~ 25354425 (+) |
| cdc42ep4b | cdc42ep4 | coding | downstream | 960004 | 25364815 ~ 25392592 (+) |
| si:ch211-216b21.2 | LOC106589629 | coding | downstream | 1598461 | 26003272 ~ 26050911 (+) |
| LOC110499247 | LOC106589631 | coding | downstream | 1825334 | 26230145 ~ 26235558 (+) |
| G1675662 | NA | non-coding | upstream | 162722 | 24241367 ~ 24241730 (+) |
| G1675585 | csnk1d | non-coding | upstream | 217964 | 24180359 ~ 24186488 (+) |
| G1675586 | csnk1d | non-coding | upstream | 225034 | 24178949 ~ 24179418 (+) |
| G1675556 | NA | non-coding | upstream | 321271 | 24082350 ~ 24083181 (+) |
| G1676610 | NA | non-coding | downstream | 133 | 24404944 ~ 24405223 (+) |
| G1676611 | Rpl38 | non-coding | downstream | 2679 | 24407490 ~ 24409559 (+) |
| G1676642 | NA | non-coding | downstream | 23928 | 24428739 ~ 24429172 (+) |
| G1676736 | NA | non-coding | downstream | 107222 | 24512033 ~ 24512237 (+) |
| G1676738 | NA | non-coding | downstream | 108220 | 24513031 ~ 24513335 (+) |
| faap100 | faap100 | other | upstream | 823020 | 23576429 ~ 23582556 (+) |
| LOC110499192 | LOC106589579 | other | upstream | 1146383 | 23252800 ~ 23269058 (+) |
| LOC110513322 | rsl1d1 | other | upstream | 2444825 | 21936590 ~ 21959627 (+) |
| tnrc6b | LOC106589538 | other | upstream | 2558586 | 21806703 ~ 21848442 (+) |
| G1673231 | LOC106589530 | other | upstream | 2954106 | 21444883 ~ 21450346 (+) |
| G1677419 | LOC100194703 | other | downstream | 677853 | 25082664 ~ 25083277 (+) |
| G1677738 | NA | other | downstream | 1231880 | 25636691 ~ 25641614 (+) |
| G1678963 | NA | other | downstream | 2057383 | 26462194 ~ 26467953 (+) |
| LOC110499256 | LOC106589642 | other | downstream | 2227324 | 26632095 ~ 26639269 (+) |
| LOC110499259 | LOC106589644 | other | downstream | 2249816 | 26654584 ~ 26656111 (+) |
