G1676754


Basic Information

Item Value
gene id G1676754
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 24523749 ~ 24524213 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1918343
gtctcccacctcagctgtagatctctgcagttcatccagagtgatcatgggcctcttggctgcatctctgatcagtcttctccttgtatgagctgaaagtttagcgggacagccaggtcttggtagatttgcagtggtctgatactccttccatttcaatattatcgcttgcacagtgctccttgggatgtttaaagcttgggaaatctttttgtatccaaatccggctttaaacttcttcacaacagtatctcggacctgcctggtgtgttccttgttcttcatgatgctctctgcgcttttaacggacctctgagactatcacagtgcaggtggattgtatttatcatcattagtcatttaggtcaacattggatcattcagagatcctcactgaacttctggagagagtttgctgcactgaaagtaaaggggctgaataattttgcacgcccaatttttcag

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1918343 True 465 lncRNA 0.45 1 24523749 24524213

Neighbor

gene id symbol gene type direction distance location
LOC118942055 NA coding upstream 334290 24183559 ~ 24189459 (+)
slc16a3 LOC106610249 coding upstream 354257 24146065 ~ 24169492 (+)
LOC110499226 gps1 coding upstream 494868 24020687 ~ 24090566 (+)
LOC110499218 rac3 coding upstream 546294 23972492 ~ 23977455 (+)
lrrc45 lrrc45 coding upstream 559291 23946660 ~ 23964458 (+)
LOC110499595 NA coding downstream 105330 24629543 ~ 24632101 (+)
sdk2b sdk2 coding downstream 368717 24892930 ~ 25354425 (+)
cdc42ep4b cdc42ep4 coding downstream 840602 25364815 ~ 25392592 (+)
si:ch211-216b21.2 LOC106589629 coding downstream 1479059 26003272 ~ 26050911 (+)
LOC110499247 LOC106589631 coding downstream 1705932 26230145 ~ 26235558 (+)
G1676738 NA non-coding upstream 10414 24513031 ~ 24513335 (+)
G1676736 NA non-coding upstream 11512 24512033 ~ 24512237 (+)
G1676642 NA non-coding upstream 94577 24428739 ~ 24429172 (+)
G1676611 Rpl38 non-coding upstream 114190 24407490 ~ 24409559 (+)
G1676610 NA non-coding upstream 118526 24404944 ~ 24405223 (+)
G1676759 NA non-coding downstream 2853 24527066 ~ 24527287 (+)
G1676781 NA non-coding downstream 17460 24541673 ~ 24541932 (+)
G1676789 NA non-coding downstream 21915 24546128 ~ 24546344 (+)
G1676812 NA non-coding downstream 36110 24560323 ~ 24560540 (+)
G1676831 NA non-coding downstream 49823 24574036 ~ 24574410 (+)
faap100 faap100 other upstream 942317 23576429 ~ 23582556 (+)
LOC110499192 LOC106589579 other upstream 1265680 23252800 ~ 23269058 (+)
LOC110513322 rsl1d1 other upstream 2564122 21936590 ~ 21959627 (+)
tnrc6b LOC106589538 other upstream 2677883 21806703 ~ 21848442 (+)
G1673231 LOC106589530 other upstream 3073403 21444883 ~ 21450346 (+)
G1677419 LOC100194703 other downstream 558451 25082664 ~ 25083277 (+)
G1677738 NA other downstream 1112478 25636691 ~ 25641614 (+)
G1678963 NA other downstream 1937981 26462194 ~ 26467953 (+)
LOC110499256 LOC106589642 other downstream 2107922 26632095 ~ 26639269 (+)
LOC110499259 LOC106589644 other downstream 2130414 26654584 ~ 26656111 (+)

Expression


Co-expression Network