G1676789


Basic Information

Item Value
gene id G1676789
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 24546128 ~ 24546344 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1918378
ctttgtttactgttgtgctatcatcagataatagcttctcatgctttcgccgaaaagcctttttaaaatctgacatgttggctggattcacaacgagtgtagctttaatttagtatcttacatgtgtgatttaatgaaagtttgatttctatatcattttatttgaatttgccgcactgcattttccctggcttttggccagcgtcccctataccat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1918378 True 217 lncRNA 0.37 1 24546128 24546344

Neighbor

gene id symbol gene type direction distance location
LOC118942055 NA coding upstream 356669 24183559 ~ 24189459 (+)
slc16a3 LOC106610249 coding upstream 376636 24146065 ~ 24169492 (+)
LOC110499226 gps1 coding upstream 517247 24020687 ~ 24090566 (+)
LOC110499218 rac3 coding upstream 568673 23972492 ~ 23977455 (+)
lrrc45 lrrc45 coding upstream 581670 23946660 ~ 23964458 (+)
LOC110499595 NA coding downstream 83199 24629543 ~ 24632101 (+)
sdk2b sdk2 coding downstream 346586 24892930 ~ 25354425 (+)
cdc42ep4b cdc42ep4 coding downstream 818471 25364815 ~ 25392592 (+)
si:ch211-216b21.2 LOC106589629 coding downstream 1456928 26003272 ~ 26050911 (+)
LOC110499247 LOC106589631 coding downstream 1683801 26230145 ~ 26235558 (+)
G1676781 NA non-coding upstream 4196 24541673 ~ 24541932 (+)
G1676759 NA non-coding upstream 18841 24527066 ~ 24527287 (+)
G1676754 NA non-coding upstream 21915 24523749 ~ 24524213 (+)
G1676738 NA non-coding upstream 32793 24513031 ~ 24513335 (+)
G1676736 NA non-coding upstream 33891 24512033 ~ 24512237 (+)
G1676812 NA non-coding downstream 13979 24560323 ~ 24560540 (+)
G1676831 NA non-coding downstream 27692 24574036 ~ 24574410 (+)
G1676878 NA non-coding downstream 66718 24613062 ~ 24613686 (+)
G1676993 NA non-coding downstream 157439 24703783 ~ 24704010 (+)
G1677003 NA non-coding downstream 162548 24708892 ~ 24709115 (+)
faap100 faap100 other upstream 964696 23576429 ~ 23582556 (+)
LOC110499192 LOC106589579 other upstream 1288059 23252800 ~ 23269058 (+)
LOC110513322 rsl1d1 other upstream 2586501 21936590 ~ 21959627 (+)
tnrc6b LOC106589538 other upstream 2700262 21806703 ~ 21848442 (+)
G1673231 LOC106589530 other upstream 3095782 21444883 ~ 21450346 (+)
G1677419 LOC100194703 other downstream 536320 25082664 ~ 25083277 (+)
G1677738 NA other downstream 1090347 25636691 ~ 25641614 (+)
G1678963 NA other downstream 1915850 26462194 ~ 26467953 (+)
LOC110499256 LOC106589642 other downstream 2085791 26632095 ~ 26639269 (+)
LOC110499259 LOC106589644 other downstream 2108283 26654584 ~ 26656111 (+)

Expression


Co-expression Network