Gene
RNA
| Item | Value |
|---|---|
| gene id | G1676812 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048584.1 |
| NCBI id | CM023238.2 |
| chromosome length | 46616863 |
| location | 24560323 ~ 24560540 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1918401 | True | 218 | lncRNA | 0.38 | 1 | 24560323 | 24560540 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118942055 | NA | coding | upstream | 370864 | 24183559 ~ 24189459 (+) |
| slc16a3 | LOC106610249 | coding | upstream | 390831 | 24146065 ~ 24169492 (+) |
| LOC110499226 | gps1 | coding | upstream | 531442 | 24020687 ~ 24090566 (+) |
| LOC110499218 | rac3 | coding | upstream | 582868 | 23972492 ~ 23977455 (+) |
| lrrc45 | lrrc45 | coding | upstream | 595865 | 23946660 ~ 23964458 (+) |
| LOC110499595 | NA | coding | downstream | 69003 | 24629543 ~ 24632101 (+) |
| sdk2b | sdk2 | coding | downstream | 332390 | 24892930 ~ 25354425 (+) |
| cdc42ep4b | cdc42ep4 | coding | downstream | 804275 | 25364815 ~ 25392592 (+) |
| si:ch211-216b21.2 | LOC106589629 | coding | downstream | 1442732 | 26003272 ~ 26050911 (+) |
| LOC110499247 | LOC106589631 | coding | downstream | 1669605 | 26230145 ~ 26235558 (+) |
| G1676789 | NA | non-coding | upstream | 13979 | 24546128 ~ 24546344 (+) |
| G1676781 | NA | non-coding | upstream | 18391 | 24541673 ~ 24541932 (+) |
| G1676759 | NA | non-coding | upstream | 33036 | 24527066 ~ 24527287 (+) |
| G1676754 | NA | non-coding | upstream | 36110 | 24523749 ~ 24524213 (+) |
| G1676738 | NA | non-coding | upstream | 46988 | 24513031 ~ 24513335 (+) |
| G1676831 | NA | non-coding | downstream | 13496 | 24574036 ~ 24574410 (+) |
| G1676878 | NA | non-coding | downstream | 52522 | 24613062 ~ 24613686 (+) |
| G1676993 | NA | non-coding | downstream | 143243 | 24703783 ~ 24704010 (+) |
| G1677003 | NA | non-coding | downstream | 148352 | 24708892 ~ 24709115 (+) |
| G1677037 | NA | non-coding | downstream | 169968 | 24730508 ~ 24730867 (+) |
| faap100 | faap100 | other | upstream | 978891 | 23576429 ~ 23582556 (+) |
| LOC110499192 | LOC106589579 | other | upstream | 1302254 | 23252800 ~ 23269058 (+) |
| LOC110513322 | rsl1d1 | other | upstream | 2600696 | 21936590 ~ 21959627 (+) |
| tnrc6b | LOC106589538 | other | upstream | 2714457 | 21806703 ~ 21848442 (+) |
| G1673231 | LOC106589530 | other | upstream | 3109977 | 21444883 ~ 21450346 (+) |
| G1677419 | LOC100194703 | other | downstream | 522124 | 25082664 ~ 25083277 (+) |
| G1677738 | NA | other | downstream | 1076151 | 25636691 ~ 25641614 (+) |
| G1678963 | NA | other | downstream | 1901654 | 26462194 ~ 26467953 (+) |
| LOC110499256 | LOC106589642 | other | downstream | 2071595 | 26632095 ~ 26639269 (+) |
| LOC110499259 | LOC106589644 | other | downstream | 2094087 | 26654584 ~ 26656111 (+) |
