G1676993


Basic Information

Item Value
gene id G1676993
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 24703783 ~ 24704010 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1918590
gtataggaccaaaaggctccttaacagcttctactcccaagccataagactgctgaacaattaatcaaatggccacctggactttttacattttttttttacattgctgctactcgatgtttattatctatgcatagtcactttacaaatgacctcgactaacctgtactcccacacattgactcggtaccggtaccccctgtatatagcctcgtcacTGTTGTgtaa

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1918590 True 228 lncRNA 0.41 1 24703783 24704010

Neighbor

gene id symbol gene type direction distance location
LOC110499595 NA coding upstream 71682 24629543 ~ 24632101 (+)
LOC118942055 NA coding upstream 514324 24183559 ~ 24189459 (+)
slc16a3 LOC106610249 coding upstream 534291 24146065 ~ 24169492 (+)
LOC110499226 gps1 coding upstream 674902 24020687 ~ 24090566 (+)
LOC110499218 rac3 coding upstream 726328 23972492 ~ 23977455 (+)
sdk2b sdk2 coding downstream 188920 24892930 ~ 25354425 (+)
cdc42ep4b cdc42ep4 coding downstream 660805 25364815 ~ 25392592 (+)
si:ch211-216b21.2 LOC106589629 coding downstream 1299262 26003272 ~ 26050911 (+)
LOC110499247 LOC106589631 coding downstream 1526135 26230145 ~ 26235558 (+)
sgca LOC106589632 coding downstream 1559049 26263059 ~ 26284385 (+)
G1676878 NA non-coding upstream 90097 24613062 ~ 24613686 (+)
G1676831 NA non-coding upstream 129373 24574036 ~ 24574410 (+)
G1676812 NA non-coding upstream 143243 24560323 ~ 24560540 (+)
G1676789 NA non-coding upstream 157439 24546128 ~ 24546344 (+)
G1676781 NA non-coding upstream 161851 24541673 ~ 24541932 (+)
G1677003 NA non-coding downstream 4882 24708892 ~ 24709115 (+)
G1677037 NA non-coding downstream 26498 24730508 ~ 24730867 (+)
G1677090 NA non-coding downstream 90366 24794376 ~ 24849004 (+)
G1677229 NA non-coding downstream 161913 24865923 ~ 24866134 (+)
G1677233 NA non-coding downstream 166961 24870971 ~ 24871197 (+)
faap100 faap100 other upstream 1122351 23576429 ~ 23582556 (+)
LOC110499192 LOC106589579 other upstream 1445714 23252800 ~ 23269058 (+)
LOC110513322 rsl1d1 other upstream 2744156 21936590 ~ 21959627 (+)
tnrc6b LOC106589538 other upstream 2857917 21806703 ~ 21848442 (+)
G1673231 LOC106589530 other upstream 3253437 21444883 ~ 21450346 (+)
G1677419 LOC100194703 other downstream 378654 25082664 ~ 25083277 (+)
G1677738 NA other downstream 932681 25636691 ~ 25641614 (+)
G1678963 NA other downstream 1758184 26462194 ~ 26467953 (+)
LOC110499256 LOC106589642 other downstream 1928125 26632095 ~ 26639269 (+)
LOC110499259 LOC106589644 other downstream 1950617 26654584 ~ 26656111 (+)

Expression


Co-expression Network