Gene
RNA
| Item | Value |
|---|---|
| gene id | G1677229 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048584.1 |
| NCBI id | CM023238.2 |
| chromosome length | 46616863 |
| location | 24865923 ~ 24866134 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1918831 | True | 212 | lncRNA | 0.33 | 1 | 24865923 | 24866134 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110499595 | NA | coding | upstream | 233822 | 24629543 ~ 24632101 (+) |
| LOC118942055 | NA | coding | upstream | 676464 | 24183559 ~ 24189459 (+) |
| slc16a3 | LOC106610249 | coding | upstream | 696431 | 24146065 ~ 24169492 (+) |
| LOC110499226 | gps1 | coding | upstream | 837042 | 24020687 ~ 24090566 (+) |
| LOC110499218 | rac3 | coding | upstream | 888468 | 23972492 ~ 23977455 (+) |
| sdk2b | sdk2 | coding | downstream | 26796 | 24892930 ~ 25354425 (+) |
| cdc42ep4b | cdc42ep4 | coding | downstream | 498681 | 25364815 ~ 25392592 (+) |
| si:ch211-216b21.2 | LOC106589629 | coding | downstream | 1137138 | 26003272 ~ 26050911 (+) |
| LOC110499247 | LOC106589631 | coding | downstream | 1364011 | 26230145 ~ 26235558 (+) |
| sgca | LOC106589632 | coding | downstream | 1396925 | 26263059 ~ 26284385 (+) |
| G1677090 | NA | non-coding | upstream | 16919 | 24794376 ~ 24849004 (+) |
| G1677037 | NA | non-coding | upstream | 135056 | 24730508 ~ 24730867 (+) |
| G1677003 | NA | non-coding | upstream | 156808 | 24708892 ~ 24709115 (+) |
| G1676993 | NA | non-coding | upstream | 161913 | 24703783 ~ 24704010 (+) |
| G1676878 | NA | non-coding | upstream | 252237 | 24613062 ~ 24613686 (+) |
| G1677233 | NA | non-coding | downstream | 4837 | 24870971 ~ 24871197 (+) |
| G1677303 | NA | non-coding | downstream | 63784 | 24929918 ~ 24930381 (+) |
| G1677367 | NA | non-coding | downstream | 140754 | 25006888 ~ 25007244 (+) |
| G1677389 | NA | non-coding | downstream | 176105 | 25042239 ~ 25042990 (+) |
| G1677396 | NA | non-coding | downstream | 188057 | 25054191 ~ 25058093 (+) |
| faap100 | faap100 | other | upstream | 1284491 | 23576429 ~ 23582556 (+) |
| LOC110499192 | LOC106589579 | other | upstream | 1607854 | 23252800 ~ 23269058 (+) |
| LOC110513322 | rsl1d1 | other | upstream | 2906296 | 21936590 ~ 21959627 (+) |
| tnrc6b | LOC106589538 | other | upstream | 3020057 | 21806703 ~ 21848442 (+) |
| G1673231 | LOC106589530 | other | upstream | 3415577 | 21444883 ~ 21450346 (+) |
| G1677419 | LOC100194703 | other | downstream | 216530 | 25082664 ~ 25083277 (+) |
| G1677738 | NA | other | downstream | 770557 | 25636691 ~ 25641614 (+) |
| G1678963 | NA | other | downstream | 1596060 | 26462194 ~ 26467953 (+) |
| LOC110499256 | LOC106589642 | other | downstream | 1766001 | 26632095 ~ 26639269 (+) |
| LOC110499259 | LOC106589644 | other | downstream | 1788493 | 26654584 ~ 26656111 (+) |
