G1677487


Basic Information

Item Value
gene id G1677487
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 25201220 ~ 25201567 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1919127
gccactgcctgtttaccccgctatcatccagaaggcgaagtcagtacaggtgcatcaaagcagggaccgagagactgaaaaacagctgccaacatactgactcaactccagccactttaataatggaaaaatttatgtaataaatgtatcactagccactttaaacaatgccacttcatataatgtttacataccctacatcaaatcaaattttatttgtcacataaacatgtttagcagatgttaatgcgagtgtagcgaaatgcttgtgcttctagttccgacaatgcag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1919127 True 292 lncRNA 0.40 2 25201220 25201567

Neighbor

gene id symbol gene type direction distance location
LOC110499595 NA coding upstream 569119 24629543 ~ 24632101 (+)
LOC118942055 NA coding upstream 1011761 24183559 ~ 24189459 (+)
slc16a3 LOC106610249 coding upstream 1031728 24146065 ~ 24169492 (+)
LOC110499226 gps1 coding upstream 1172339 24020687 ~ 24090566 (+)
LOC110499218 rac3 coding upstream 1223765 23972492 ~ 23977455 (+)
cdc42ep4b cdc42ep4 coding downstream 163248 25364815 ~ 25392592 (+)
si:ch211-216b21.2 LOC106589629 coding downstream 801705 26003272 ~ 26050911 (+)
LOC110499247 LOC106589631 coding downstream 1028578 26230145 ~ 26235558 (+)
sgca LOC106589632 coding downstream 1061492 26263059 ~ 26284385 (+)
tmem101 tmem101 coding downstream 1181938 26383505 ~ 26388284 (+)
G1677422 NA non-coding upstream 109241 25091623 ~ 25091979 (+)
G1677403 NA non-coding upstream 137857 25060540 ~ 25063363 (+)
G1677396 NA non-coding upstream 143127 25054191 ~ 25058093 (+)
G1677389 NA non-coding upstream 158230 25042239 ~ 25042990 (+)
G1677367 NA non-coding upstream 193976 25006888 ~ 25007244 (+)
G1677531 NA non-coding downstream 64782 25266349 ~ 25275068 (+)
G1677614 NA non-coding downstream 243211 25444778 ~ 25445135 (+)
G1677616 NA non-coding downstream 246188 25447755 ~ 25448030 (+)
G1677622 NA non-coding downstream 254641 25456208 ~ 25456473 (+)
G1677649 NA non-coding downstream 300301 25501868 ~ 25502129 (+)
G1677419 LOC100194703 other upstream 117943 25082664 ~ 25083277 (+)
faap100 faap100 other upstream 1619788 23576429 ~ 23582556 (+)
LOC110499192 LOC106589579 other upstream 1943151 23252800 ~ 23269058 (+)
LOC110513322 rsl1d1 other upstream 3241593 21936590 ~ 21959627 (+)
tnrc6b LOC106589538 other upstream 3355354 21806703 ~ 21848442 (+)
G1677738 NA other downstream 435124 25636691 ~ 25641614 (+)
G1678963 NA other downstream 1260627 26462194 ~ 26467953 (+)
LOC110499256 LOC106589642 other downstream 1430568 26632095 ~ 26639269 (+)
LOC110499259 LOC106589644 other downstream 1453060 26654584 ~ 26656111 (+)
G1679135 NA other downstream 1498825 26700392 ~ 26775680 (+)

Expression


Co-expression Network