Gene
RNA
| Item | Value |
|---|---|
| gene id | G1678907 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048584.1 |
| NCBI id | CM023238.2 |
| chromosome length | 46616863 |
| location | 26370687 ~ 26409656 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1920636 | True | 1091 | lncRNA | 0.35 | 2 | 26370687 | 26409656 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| sgca | LOC106589632 | coding | upstream | 95706 | 26263059 ~ 26284385 (+) |
| LOC110499247 | LOC106589631 | coding | upstream | 135129 | 26230145 ~ 26235558 (+) |
| si:ch211-216b21.2 | LOC106589629 | coding | upstream | 319776 | 26003272 ~ 26050911 (+) |
| cdc42ep4b | cdc42ep4 | coding | upstream | 978095 | 25364815 ~ 25392592 (+) |
| sdk2b | sdk2 | coding | upstream | 1016262 | 24892930 ~ 25354425 (+) |
| LOC110499256 | LOC106589642 | coding | downstream | 222439 | 26632095 ~ 26639269 (+) |
| LOC110499259 | LOC106589644 | coding | downstream | 244928 | 26654584 ~ 26656111 (+) |
| LOC110498782 | LOC105021192 | coding | downstream | 373454 | 26783110 ~ 26785166 (+) |
| si:zfos-1056e6.1 | LOC105021192 | coding | downstream | 385518 | 26795174 ~ 26802125 (+) |
| dld | LOC100380662 | coding | downstream | 464810 | 26874466 ~ 26880268 (+) |
| G1678889 | NA | non-coding | upstream | 36734 | 26333738 ~ 26333953 (+) |
| G1678881 | NA | non-coding | upstream | 48577 | 26321696 ~ 26322110 (+) |
| G1678867 | NA | non-coding | upstream | 69315 | 26301112 ~ 26301372 (+) |
| G1678820 | NA | non-coding | upstream | 72221 | 26295772 ~ 26298466 (+) |
| G1679041 | NA | non-coding | downstream | 159777 | 26569433 ~ 26569746 (+) |
| G1679042 | NA | non-coding | downstream | 160163 | 26569819 ~ 26570088 (+) |
| G1679044 | NA | non-coding | downstream | 164692 | 26574348 ~ 26574588 (+) |
| G1679046 | NA | non-coding | downstream | 169777 | 26579433 ~ 26579713 (+) |
| G1679056 | NA | non-coding | downstream | 184746 | 26594402 ~ 26595350 (+) |
| G1677738 | NA | other | upstream | 729073 | 25636691 ~ 25641614 (+) |
| G1677419 | LOC100194703 | other | upstream | 1287410 | 25082664 ~ 25083277 (+) |
| faap100 | faap100 | other | upstream | 2789255 | 23576429 ~ 23582556 (+) |
| LOC110499192 | LOC106589579 | other | upstream | 3112618 | 23252800 ~ 23269058 (+) |
| LOC110513322 | rsl1d1 | other | upstream | 4411060 | 21936590 ~ 21959627 (+) |
| G1678963 | NA | other | downstream | 52538 | 26462194 ~ 26467953 (+) |
| G1679135 | NA | other | downstream | 290736 | 26700392 ~ 26775680 (+) |
| G1679823 | NA | other | downstream | 674770 | 27084426 ~ 27087463 (+) |
