G1679042


Basic Information

Item Value
gene id G1679042
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 26569819 ~ 26570088 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1920775
gtgtgtataaggtagtagttttggaattgttagttagattacttgttggttattactgcatggtcggaactagaagcacaagcatttcgctacacttgcattaacatctgctaaccatgtgtaagtgacaaatacatttgatttgatttgttgtttgTCCTGAGCCAGCAGCCTATTAATTTCAGGCGAGTAGTCAGGAGTCATCCACAATGCATCGACTCTTCATTTGTCCTCTCCTGACACGGTATGTACTGTGAGCCGGTGTGTGTA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1920775 True 270 lncRNA 0.41 1 26569819 26570088

Neighbor

gene id symbol gene type direction distance location
g6pc3 g6pc3 coding upstream 162405 26405112 ~ 26407414 (+)
tmem101 tmem101 coding upstream 181535 26383505 ~ 26388284 (+)
sgca LOC106589632 coding upstream 294838 26263059 ~ 26284385 (+)
LOC110499247 LOC106589631 coding upstream 334261 26230145 ~ 26235558 (+)
si:ch211-216b21.2 LOC106589629 coding upstream 518908 26003272 ~ 26050911 (+)
LOC110499256 LOC106589642 coding downstream 62007 26632095 ~ 26639269 (+)
LOC110499259 LOC106589644 coding downstream 84496 26654584 ~ 26656111 (+)
LOC110498782 LOC105021192 coding downstream 213022 26783110 ~ 26785166 (+)
si:zfos-1056e6.1 LOC105021192 coding downstream 225086 26795174 ~ 26802125 (+)
dld LOC100380662 coding downstream 304378 26874466 ~ 26880268 (+)
G1679041 NA non-coding upstream 73 26569433 ~ 26569746 (+)
G1678907 NA non-coding upstream 160163 26370687 ~ 26409656 (+)
G1678910 NA non-coding upstream 176446 26388963 ~ 26393373 (+)
G1678925 NA non-coding upstream 194680 26373766 ~ 26375139 (+)
G1678889 NA non-coding upstream 235866 26333738 ~ 26333953 (+)
G1679044 NA non-coding downstream 4260 26574348 ~ 26574588 (+)
G1679046 NA non-coding downstream 9345 26579433 ~ 26579713 (+)
G1679056 NA non-coding downstream 24314 26594402 ~ 26595350 (+)
G1679082 NA non-coding downstream 53564 26623652 ~ 26623942 (+)
G1679085 NA non-coding downstream 57909 26627997 ~ 26628326 (+)
G1678963 NA other upstream 101866 26462194 ~ 26467953 (+)
G1677738 NA other upstream 928205 25636691 ~ 25641614 (+)
G1677419 LOC100194703 other upstream 1486542 25082664 ~ 25083277 (+)
faap100 faap100 other upstream 2988387 23576429 ~ 23582556 (+)
LOC110499192 LOC106589579 other upstream 3311750 23252800 ~ 23269058 (+)
G1679135 NA other downstream 130304 26700392 ~ 26775680 (+)
G1679823 NA other downstream 514338 27084426 ~ 27087463 (+)
G1680230 NA other downstream 805266 27375354 ~ 27375819 (+)

Expression


Co-expression Network