Gene
RNA
| Item | Value |
|---|---|
| gene id | G1679614 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048584.1 |
| NCBI id | CM023238.2 |
| chromosome length | 46616863 |
| location | 26631284 ~ 26631561 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1921399 | True | 278 | lncRNA | 0.36 | 1 | 26631284 | 26631561 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| tanc2b | LOC106589639 | coding | downstream | 1438 | 26409473 ~ 26629846 (-) |
| lsm12b | lsm12 | coding | downstream | 226318 | 26400137 ~ 26404966 (-) |
| gngt2b | NA | coding | downstream | 247862 | 26373643 ~ 26383422 (-) |
| si:ch1073-13h15.3 | LOC107387676 | coding | downstream | 265773 | 26360190 ~ 26365511 (-) |
| col1a1b | col1a3 | coding | downstream | 332803 | 26276154 ~ 26298481 (-) |
| cntd1 | cntd1 | coding | upstream | 7222 | 26638783 ~ 26654541 (-) |
| wnk4a | wnk4 | coding | upstream | 24456 | 26655356 ~ 26732426 (-) |
| vps25 | vps25 | coding | upstream | 102410 | 26733971 ~ 26737726 (-) |
| LOC110499261 | LOC106589645 | coding | upstream | 108211 | 26739772 ~ 26769099 (-) |
| hltf | hltf | coding | upstream | 137936 | 26769497 ~ 26783023 (-) |
| G1679610 | NA | non-coding | downstream | 4753 | 26626262 ~ 26626531 (-) |
| G1679606 | NA | non-coding | downstream | 6712 | 26623973 ~ 26624572 (-) |
| G1679586 | NA | non-coding | downstream | 43456 | 26587451 ~ 26587828 (-) |
| G1679575 | NA | non-coding | downstream | 51540 | 26579542 ~ 26579744 (-) |
| G1679618 | NA | non-coding | upstream | 6268 | 26637829 ~ 26638100 (-) |
| G1679644 | NA | non-coding | upstream | 64425 | 26695986 ~ 26699117 (-) |
| G1679645 | NA | non-coding | upstream | 65998 | 26697559 ~ 26700746 (-) |
| G1679689 | NA | non-coding | upstream | 185086 | 26816647 ~ 26816859 (-) |
| fbxw10 | cdrt1 | other | downstream | 421405 | 26208532 ~ 26229024 (-) |
| G1678462 | NA | other | downstream | 926160 | 25704621 ~ 25705124 (-) |
| G1678242 | cdc42ep4 | other | downstream | 1238708 | 25387881 ~ 25392576 (-) |
| G1677008 | NA | other | downstream | 1920786 | 24710125 ~ 24710498 (-) |
| G1680017 | NA | other | upstream | 413221 | 27044782 ~ 27045294 (-) |
| G1680171 | cog2 | other | upstream | 649262 | 27280823 ~ 27283995 (-) |
| sf3b5 | sf3b5 | other | upstream | 750424 | 27381985 ~ 27384608 (-) |
| LOC110499285 | olig3 | other | upstream | 1117992 | 27748849 ~ 27750461 (-) |
| fa36a | fa36a | other | upstream | 1229180 | 27860741 ~ 27864828 (-) |
