Gene
RNA
| Item | Value |
|---|---|
| gene id | G1679618 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048584.1 |
| NCBI id | CM023238.2 |
| chromosome length | 46616863 |
| location | 26637829 ~ 26638100 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1921403 | True | 272 | lncRNA | 0.37 | 1 | 26637829 | 26638100 |
26,636,400
26,636,800
26,637,200
26,637,600
26,638,000
26,638,400
26,638,800
26,639,200
26,639,600
26,640,000
26,640,400
26,640,800
NC_048584.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| tanc2b | LOC106589639 | coding | downstream | 7983 | 26409473 ~ 26629846 (-) |
| lsm12b | lsm12 | coding | downstream | 232863 | 26400137 ~ 26404966 (-) |
| gngt2b | NA | coding | downstream | 254407 | 26373643 ~ 26383422 (-) |
| si:ch1073-13h15.3 | LOC107387676 | coding | downstream | 272318 | 26360190 ~ 26365511 (-) |
| col1a1b | col1a3 | coding | downstream | 339348 | 26276154 ~ 26298481 (-) |
| cntd1 | cntd1 | coding | upstream | 683 | 26638783 ~ 26654541 (-) |
| wnk4a | wnk4 | coding | upstream | 17917 | 26655356 ~ 26732426 (-) |
| vps25 | vps25 | coding | upstream | 95871 | 26733971 ~ 26737726 (-) |
| LOC110499261 | LOC106589645 | coding | upstream | 101672 | 26739772 ~ 26769099 (-) |
| hltf | hltf | coding | upstream | 131397 | 26769497 ~ 26783023 (-) |
| G1679614 | NA | non-coding | downstream | 6268 | 26631284 ~ 26631561 (-) |
| G1679610 | NA | non-coding | downstream | 11298 | 26626262 ~ 26626531 (-) |
| G1679606 | NA | non-coding | downstream | 13257 | 26623973 ~ 26624572 (-) |
| G1679586 | NA | non-coding | downstream | 50001 | 26587451 ~ 26587828 (-) |
| G1679644 | NA | non-coding | upstream | 57886 | 26695986 ~ 26699117 (-) |
| G1679645 | NA | non-coding | upstream | 59459 | 26697559 ~ 26700746 (-) |
| G1679689 | NA | non-coding | upstream | 178547 | 26816647 ~ 26816859 (-) |
| G1679753 | NA | non-coding | upstream | 280419 | 26918519 ~ 26918821 (-) |
| fbxw10 | cdrt1 | other | downstream | 427950 | 26208532 ~ 26229024 (-) |
| G1678462 | NA | other | downstream | 932705 | 25704621 ~ 25705124 (-) |
| G1678242 | cdc42ep4 | other | downstream | 1245253 | 25387881 ~ 25392576 (-) |
| G1677008 | NA | other | downstream | 1927331 | 24710125 ~ 24710498 (-) |
| G1680017 | NA | other | upstream | 406682 | 27044782 ~ 27045294 (-) |
| G1680171 | cog2 | other | upstream | 642723 | 27280823 ~ 27283995 (-) |
| sf3b5 | sf3b5 | other | upstream | 743885 | 27381985 ~ 27384608 (-) |
| LOC110499285 | olig3 | other | upstream | 1111453 | 27748849 ~ 27750461 (-) |
| fa36a | fa36a | other | upstream | 1222641 | 27860741 ~ 27864828 (-) |
