XLOC_000036 (atp1a1a.1)


Basic Information

Item Value
gene id XLOC_000036
gene name atp1a1a.1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007112.7
NCBI id CM002885.2
chromosome length 59578282
location 1712140 ~ 1796832 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00000066
ATGAACTGACTGTAACGCGGCTCGGATGCGTGTCTGGGTGGTACTACGCGTCCGGCGGTGACCAAGGAGAGAATACATTTGAAAAAGCCCCAAAAAGAGAGGAAACGGGATCggggacttttaatttgttgttttgaaagaaagctcggatttgttttattttttgggaaTTCCCAGGTGGTCGATTTTAATCAAAAGCAGCAAAATGGGACGAGGAGAAGGCCGAGAACAATATGAGCTGGCAGCCACCTCAGAGCAGGGGGGCAAGAAGTCAAAGTCCAAGGGCAAGAAAGAGAAGGATAAAGACATGGATGAACTCAAAAAAGAAGTGGACTTGGACGATCACAAACTGTCCCTGGATGAGCTCACCAGGAAATATAACACTGATTTGACAAGGGGATTGTCAGGCACTCGTGCTAAGGAGATCTTGGCACGTGATGGACCCAACGCTTTGACTCCACCTCCCACAACCCCAGAATGGGTCAAGTTCTGCAAGCAGCTCTTTGGAGGATTCTCAACTCTCCTGTGGATTGGAGCCATCCTTTGTTTTCTTGCCTACGGCATCCTGGCGGCCTCTGAGGAGGAGCCTGCCAATGATAATTTGTATCTGGGTATTGTGCTTTCTGCTGTCGTGATGATCACTGGATGCTTCTCGTACTATCAAGAAGCCAAGAGCTCCAAGATCATGGACTCTTTCAAGAATTTGGTTCCCCAGCAAGCCTTGGTTATCCGTGATGGTGAGAAGAAGAACATCAACGCTGAAGAAGTTGCTGTCGGAGATCTTGTGGAAGTCAAAGGTGGTGACAGAATTCCTGCTGATTTGCGTATCATTTCTGCTCATGGATGCAAGGTGGACAACTCCTCCCTCACTGGAGAATCTGAACCCCAGACTCGTACTCCTGACTTTTCCAATGATAACCCACTGGAGACCAGGAACATTGCGTTCTTCTCTACCAACTGTGTTGAAGGTACTGCCAGAGGAATTGTCATCAACACTGGTGACCGCACAGTCATGGGTCGCATCGCCACTCTCGCTTCTGGCCTTGAAGTTGGTCGCACCCCCATCTCTATTGAGATCGAGCACTTCATCCACATCATCACTGGTGTAGCTGTCTTCCTGGGTGTGTCCTTCTTCATCCTCTCCCTCATCCTTGGGTACAGTTGGTTGGAGGCTGTCATCTTCCTGATTGGTATCATTGTTGCGAATGTACCAGAGGGTCTCTTGGCTACTGTAACTgtgtgtttgactctCACCGCCAAACGAATGGCAAAGAAGAACTGCCTGGTGAAGAATCTTGAAGCTGTGGAGACTCTTGGCTCGACCTCCACCATCTGCTCTGACAAGACTGGAACTTTGACCCAGAACCGGATGACCGTCGCTCACATGTGGTTCGACAACCAGATTCATGAAGCAGACACCACAGAGAACCAGAGTGGAACGTCTTTTGACAGGAGCTCTGCTACTTGGGCCGCCCTCGCTCGTGTTGCTGGCCTCTGCAACCGCGCCGTCTTCCTTGCTGAGCAAGAAAACATCCCAATTCTTAAGAGAGACGTGGCTGGTGACGCTTCTGAATCCGCCCTGCTGAAGTGTATCGAGCTCTGCTGTGGATCGGTGAAAGAAATGAGAGAAAAATATAACAAGATTTCAGAGATCCCATTCAACTCCACCAACAAATACCAGCTCTCCATCCACCAGAACCCCAACAGCAATAACACTGAAAGCAAACACCTGCTAGTAATGAAAGGCGCTCCTGAGAGGATCCTGGACCGGTGCTCCTCTATTTTAATCCAAGGAAAAGAGCAGCCTTTGGATGATGAGATGAAGGATGCTTTCCAGAATGCCTACCTGGAACTTGGTGGTCTTGGAGAGAGAGTACTGGgattctgccacttcaaTCTTCccgatgaacagtttcctgaggACTTCCAGTTCGATACTGAAGAAGTGAACTTCCCCACTGAGAACCTGTGCTTTATTGGCCTCATGTCCATGATTGATCCTCCTCGTGCCGCTGTACCAGATGCTGTGGGCAAATGCAGGAGCGCTGGAATCAAGGTTATCATGGTTACCGGTGACCATCCAATCACAGCCAAGGCCATTGCCAAGGGGGTGGGTATCATCTCAGAGGGCAATGAAACTGTTGAAGACATCGCTGCTCGCTTGAACATCCCTATTAATGAGGTCAACCCAAGGGATGCCAAAGCTTGCGTGATCCACGGTGGAGACCTGAAGGATCTGAGCCCTGAGCAATTAGACGATGTCTTGAAACACCACACTGAAATAGTGTTTGCCAGAACGTCTCCTCAACAGAAGCTGATTATCGTTGAAGGCTGCCAGAGACAGGGTGCCATTGTAGCCGTAACCGGTGATGGTGTCAATGATTCTCCAGCTCTGAAGAAGGCTGACATTGGTGTGGCTATGGGTATTGCTGGATCTGACGTATCCAAACAGGCTGCTGACATGATCCTTCTGGACGACAACTTTGCCTCAATTGTCACTGGAGTAGAAGAAGGTCGTCTGATCTTCGACAACTTAAAGAAGTCCATTGCCTACACACTGACCAGTAACATCCCCGAGATCACCCCTTTCCTTCTGTTCATCATTGCTAATATTCCTCTACCTTTGGGCACCGTCACCATTCTCTGTATTGATCTGGGTACCGACATGGTTCCTGCCATCTCATTGGCCTATGAAGCTGCCGAGAGTGACATCATGAAGCGTCAACCCAGAAACCCCAAAACAGACAAACTTGTGAATGAGAGGCTCATTAGCATAGCCTACGGTCAGATCGGTATGATTCAAGCTCTGGCTGGGTTCTTCACATATTTTGTCATCTTGGCTGAAAATGGCTTCCTACCATCATCACTGCTGGGCATTCGAGTGTTTTGGGATGACAAATACGTCAACGATCTGGAGGACAGTTATGGCCAGCAATGGACGTACGAGCAGAGGAAGATTGTGGAGTTCACATGCCACACTGCCTTCTTCACCAGTATAGTGATTGTACAGTGGGCAGATTTGATCATCTGCAAGACCAGAAGAAACTCTGTCTTCCAGCAGGGAATGAAAAATAAGATTCTAATCTTTGGATTGTTCGAAGAAACCGCTCTTGCAGCTTTCCTGTCCTACTGCCCGGGCATGGACGTAGCCCTCAGAATGTACCCACTTAAACCAAATTGGTGGTTCTGCGCCTTCCCCTACTCACTGCTCATCTTTATCTATGATGAAATCAGAAAACTTATCATCCGACGCAGCCCAGGAGGTTGGGTGGAGAGGGAGACCTACTATTAAAGCATCCAGTCTGCATCACACAAGTTTATTTGCATGGTTGTCTCGCTGCTCGGAATTTTAACCTCAGTAATTTGGATGTTTTTATATAGGGAATGCTTGATACAAACACTGAGATCGTGAACCAAGACATTGCGTGCCTTGTTTCTGAAGCCGGACCAAttttatacatgtttttaaaagtgtaatataaaaataaacttgcagTCAGGTCCCA
>TCONS_00000067
AACGCGGCTCGGATGCGTGTCTGGGTGGTACTACGCGTCCGGCGGTGACCAAGGAGAGAATACATTTGAAAAAGCCCCAAAAAGAGAGGAAACGGGATCggggacttttaatttgttgttttgaaagaaagctcggatttgttttattttttgggaaTTCCCAGGTGGTCGATTTTAATCAAAAGCACTCTTTGGAGGATTCTCAACTCTCCTGTGGATTGGAGCCATCCTTTGTTTTCTTGCCTACGGCATCCTGGCGGCCTCTGAGGAGGAGCCTGCCAATGATAATTTGTATCTGGGTATTGTGCTTTCTGCTGTCGTGATGATCACTGGATGCTTCTCGTACTATCAAGAAGCCAAGAGCTCCAAGATCATGGACTCTTTCAAGAATTTGGTTCCCCAGCAAGCCTTGGTTATCCGTGATGGTGAGAAGAAGAACATCAACGCTGAAGAAGTTGCTGTCGGAGATCTTGTGGAAGTCAAAGGTGGTGACAGAATTCCTGCTGATTTGCGTATCATTTCTGCTCATGGATGCAAGGTGGACAACTCCTCCCTCACTGGAGAATCTGAACCCCAGACTCGTACTCCTGACTTTTCCAATGATAACCCACTGGAGACCAGGAACATTGCGTTCTTCTCTACCAACTGTGTT
>TCONS_00000068
GTCAGGCACTCGTGCTAAGGAGATCTTGGCACGTGATGGACCCAACGCTTTGACTCCACCTCCCACAACCCCAGAATGGATCGGTGAAAGAAATGAGAGAAAAATATAACAAGATTTCAGAGATCCCATTCAACTCCACCAACAAATACCAGCTCTCCATCCACCAGAACCCCAACAGCAATAACACTGAAAGCAAACACCTGCTAGTAATGAAAGGCGCTCCTGAGAGGATCCTGGACCGGTGCTCCTCTATTTTAATCCAAGGAAAAGAGCAGCCTTTGGATGATGAGATGAAGGATGCTTTCCAGAATGCCTACCTGGAACTTGGTGGTCTTGGAGAGAGAGTACTGGgattctgccacttcaaTCTTCccgatgaacagtttcctgaggACTTCCAGTTCGATACTGAAGAAGTGAACTTCCCCACTGAGAACCTGTGCTTTATTGGCCTCATGTCCATGATTGATCCTCCTCGTGCCGCTGTACCAGATGCTGTGGGCAAATGCAGGAGCGCTGGAATCAAGGTTATCATGGTTACCGGTGACCATCCAATCACAGCCAAGGCCATTGCCAAGGGGGTGGGTATCATCTCAGAGGGCAATGAAACTGTTGAAGACATCGCTGCTCGCTTGAACATCCCTATTAATGAGGTCAACCCAAGGGATGCCAAAGCTTGCGTGATCCACGGTGGAGACCTGAAGGATCTGAGCCCTGAGCAATTAGACGATGTCTTGAAACACCACACTGAAATAGTGTTTGCCAGAACGTCTCCTCAACAGAAGCTGATTATCGTTGAAGGCTGCCAGAGACAGGGTGCCATTGTAGCCGTAACCGGTGATGGTGTCAATGATTCTCCAGCTCTGA
>TCONS_00000069
AGGTACTGCCAGAGGAATTGTCATCAACACTGGTGACCGCACAGTCATGGGTCGCATCGCCACTCTCGCTTCTGGCCTTGAAGTTGGTCGCACCCCCATCTCTATTGAGATCGAGCACTTCATCCACATCATCACTGGTGTAGCTGTCTTCCTGGGTGTGTCCTTCTTCATCCTCTCCCTCATCCTTGGGTACAGTTGGTTGGAGGCTGTCATCTTCCTGATTGGTATCATTGTTGCGAATGTACCAGAGGGTCTCTTGGCTACTGTAACTGTGTGTCTGACTCTCACTGCCAAACGAATGGCAAAGAAGAAC
>TCONS_00000070
GTTGCTGGCCTCTGCAACCGCGCCGTCTTCCTTGCTGAGCAAGAAAACATCCCAATTCTTAAGAGAGACGTGGCTGGTGACGCTTCTGAATCCGCCCTGCTGAAGTGTATCGAGCTCTGCTGTGGATCGGTGAAAGAAATGAGAGAAAAATATAACAAGATTTCAGAGATCCCATTCAACTCCACCAACAAATACCAGCTCTCCACCCACACCACCCAAATCTGGCACGAAAACACAGCCAACTCGCTTTCAGTCAAAGTTTCATGAGTCAAACACAGCAGAGAGAGGGCAGGGAAGGGGATCGGGTCTCTAAAGATCCACCAAATGAGCTTTTTCATCAAAGTTTTTGGCTTTGGCTCAAAACAGATCCAGTTATGCACCGCAATAAAACAGTGTATGCATCGTGGTTATTCTGA
>TCONS_00000071
ATCGGCttctgtctgagctggtgtatttgcatacagcgatctgattggctgatgcttctgtCGGCACTTAAAGTTGGACAAGTCCTAACTTGTTAAGCGCTGCCGACGGatgcacaatgcagttcagcaatgcctgacgtcacccattcaaagtgaatgggaagcattgatgcTGATGCCctatgtgaatggggcgtaagagcttgattagcctgCCCAGTTGCGTCTgattgggttggaactaaacgttACAGGACacaagccctccaggaccgagtttgggcacccctgcactaAGCTGACTCTTGAATTAGTTTAATTCAGCTAAACTTATCACAATAAGCAAATCTGAGAATATCTCTATATAATGATCATTACGCCCATAGAGTTTATGCAACATCCGTTATGTAAAAGCATTGAAAGCGGCTTTTGACTCGTGATTTTCTAATGTAATCAAATTAAGCATCTGTCCTGAACTGGTAAAACCAATTTTggttaaatatatgtatttttccaGACCAAATTGGTGGTTCTGCGCCTTCCCCTACTCACTGCTCATCTTTATCTATGATGAAATCAGAAAACTTATCATCCGACGCAGCCCAGGAGGTTGGGTGGAGAGGGAGACCTACTATTAAAGCATCCAGTCTGCATCACACAAGTTTATTTGCATGGTTGTCTCGCTGCTCGGAATTTTAACCTCAGTAATTTGGATGTTTTTATATAGGGAATGCTTGATACAAACACTGAGATCGTGAACCAAGACATTGCG
>TCONS_00000072
AGACACTTGTGTCTCCAAACAAGTCAACAAGGCAAAATTTGGGTTGAAATAATCTTGAAAAATGGGGCTTGGAacaGGGAATGATGACTACAGGTTGACACCAACATCTGAGGATGAACTCAAAAAGACTAAAAAGGGAAAGAGGAAGAAGGATGTGGATGAACTGAAGAAAGAAGTTGAACTGGATGACCACAAGCTGACACTGGATGAACTTTCTCGCAAATATGGCACCGACATGATCAAGGGCTTGTCTTCTTTTCGTGCAAAAGAGGTCCTGGACCGCGATGGGCCGAATGCATTGACCCCACCTCCTACAACTCCACAATGGGTGAAGTTCTGCAAACAGCTCTTCGGTGGTTTCCAAACTCTGCTGTGGTTCGGTGCATTCCTTTGTTTCTTAGCTTATGGAATCCAGGTGGCATCTGTGGAAGACGCGGCACATGACaatCTGTACCTGGGACTTGTGCTTGCGTTTGTGGTCATAGTCAATGGATGGTTCTCATTCTATCAGGAATCCAAGAGTTCCAAAATCATGGAGTCTTTCAGGAATCTTGTTCCACAGCAAGCTCTAGTTGTGCGGGATGGAGAGAAAAAGGTCATCAATGCTGAGGAGGTCGTTGTCGGTGATCTTATAGAGGTCTGTGGTGGAGACAGAATCCCTGCTGATCTGCGAATTGTCTATGCACAAGGATGCAAGGTGGACAACTCTTCCCTCACTGGTGAATCTGAGCCGCAGTCTCGTTCTCCTGAATTCTCCCATGAAAACCCTCTAGAGACAAAAAACATTGCATTTTTCTCTACCAACTGTGTTGAAGGTACTGCCAGAGGGATTGCCATCAGCACCGGTGACCGCACGATTATGGGTCGCATTGCATCACTTGCCTCCAGCCTGGAAGGTGGACAGACACCAATCGCTCGAGAGATCGAGCACTTCATCCACATCATCTCTGCTGTGTCTATTTTCTTGGGTGTGACCTTCTTCGTCCTGTCCCTGATCCTTGGATATGCGTGGATTGAAGCAGTTGTTTTCCTTATTGGAATCATTGTCGCTAATGTGCCTGAAGGTCTCCCTGCTACTGTAACTGTGTGTCTGACTCTCACTGCCAAACGAATGGCAAAGAAGAACTGCCTGGTGAAGAATCTTGAAGCTGTGGAGACTCTTGGATCAACCACCACTATTTGCTCAGACAAAACAGGAACTTTGACTCAGAACCGGATGACTGTTGCTCATATGTGGTTCGACAGCCAGATTCATGAAGCAGACACCACAGAGAACCAGAGTGGAACCTCCTTTGACAGAAGCTCTCCTACTTGGGCGGCCCTCGCTCGTGTTGCTGGCCTCTGCAATCGCGCCGTCTTCCGTGCTGAACAAAGCCATCTCCCAGTCCTTAATAGAGAGACAGCTGGTGATGCCTCCGAGTCTGCCCTCCTAAAGTGTATTGAGCTGTGCTGCGGATCAGTCATTGAAATGAGAGAGAAGTACAGAAAGATTTGTGAGATTCCTTTCAACTCCACCAACAAGTATCAGCTCTCGGTCCACAAGGATCCCAGTTCCTCAGGTACTAAACACCTGCTGGTGATGAAGGGAGCACCTGAGAGAATCTTGGACCGATGCTCCACCATTTTAATTAATGGAAAAGAGCAGCCTATGGACGACGAAAATAAAGATTCTTTTCAAAGTGCTTATGTGGAACTCGGAGGTCTTGGAGAAAGAGTCCTGGGTTTCTGCCAATTTAACCTGCCTGATGACCAGTTTCCTGAGGGTTTTGCATTTGATCCTGAGGATGTTAACTTCCCCACTGAGAACCTGTGCTTTCTTGGCCTCATGTCCATGATTGATCCTCCTCGTGCCGCTGTACCAGATGCTGTAGCCAAGTGCCGGAGTGCTGGAATCAAgGTCATCATGGTTACTGGTGACCATCCAATTACAGCTAAAGCTATTGCAAAAGGTGTTGGCATCATCTCAGAAGGCAATGAGACTGTTGAAGACATTGCCGCTCGCATGAACATCCCTGTTGGAGAGGTTAATCCGAGAGAAGCTAAGGCCTGTGTGGTCCATGGTGGAGAGCTGAAGAATATGAATGACAGTGACCTGGATGAGATCCTCCGTTATCATACAGAAATTGTGTTCGCCAGAACGTCTCCACAACAAAAGCTGATCATTGTGGAAGGTTGTCAAAGACAGGGTGCCATTGTAGCCGTAACCGGTGATGGAGTCAATGATTCTCCAGCTCTGAAGAAGGCTGACATTGGTGTGGCTATGGGTATTTCTGGATCTGACGTATCCAAACAGGCTGCTGACATGATCCTTCTGGACGACAACTTTGCCTCTATTGTCACTGGAGTAGAGGAAGGTCGTCTGATCTTCGACAACTTGAAAAAGTCCATTGCCTACACACTGACTAGTAAGATCCCGGAGATGTCACCCTTCCTCATGTTTGTCGTTGTTGGTATTCCTCTACCTTTGGGCACCGTCACCATTCTCTTCATTGACCTGGGCACTGACTTGATTCCAGCTATCTCCTACGCCTATGAGAATGCAGAAAATGACATCATGAAACGGCAACCCAGAAATGCTCAGAAGGACAGGCTTGTGAATGAGAGGCTAATCAGTATGGCATATGGTCAAATCGGGATGATCCAAGCAGTAGCAGGGTTCTTCACCTACATCACGGTTATGGCCGAGAATGGATTTAGACCCTCTTATTTGCCAGGACTTCGCGTTGGCTGGGAAGATAGATCTATTGGTGATCTGGAAGACAGCTATGGCCAACAATGGACCTACGAAGGAAGAAAGATTATAGAGTCTACATGCCACACAGCATTCTTCATTAGTATTGTGGTTGTGCAATGGGCTGACTTGCTCATTGTAAAGACCAGGAGGAACTCCATCCTGCAGCAGGGAATGAAAAATAAGGTCCTGATCTTTGCTTTCTTTGAGGAAGGTGCTCTGGCAGCTTTCTTGTCCTACTGCCCAGGCATGGACATTGCAGTCAGAATGTATCCTCTAAGaCCACTGTGGTGGTTCACTGCCTTACCATACGCTCTTATCATCTTTTTCTATGATGAAATTAGAAAATACATCCTGCGACGGAATCCAGGAGGCTTTGTGGAAAAAGAAACGTACTACTGAAACAAGAAGACCTTCTACTGCAAACTTATGTTCAGAGACTCTCAAAGAAAAGCGATACAGAATCTGGtgtatttcagcaaataaattcaacactgagtt
>TCONS_00000073
CATTGACCCCACCTCCTACAACTCCACAATGGGTGAAGTTCTGCAAACAGCTCTTCGGTGGTTTCCAAACTCTGCTGTGGTTCGGTGCATTCCTTTGTTTCTTAGCTTATGGAATCCAGGTGGCATCTGTGGAAGACGCGGCACATGACaatCTGTACCTGGGACTTGTGCTTGCGTTTGTGGTCATAGTCAATGGATGGTTCTCATTCTATCAGGAATCCAAGAGTTCCAAAATCATGGAGTCTTTCAGGAATCTTGTTCCACAGGTAAAGAAAAATGTGTCCTTTAATGTCCGAATGTAACTTGGTACGTGGTACTGCAGTAGTCATTGTTCTGTTCATTCAGCAAGCTCTAGTTGTGCGGGATGGAGAGAAAAAGGTCATCAATGCTGAGGAGGTCGTTGTCGGTGATCTTATAGAGGTCTGTGGTGGAGACAGAATCCCTGCTGATCTGCGAATTGTCTATGCACAAGGATGCAA

Function

symbol description
atp1a1a.1 Enables P-type sodium:potassium-exchanging transporter activity. Acts upstream of or within several processes, including animal organ development; embryonic body morphogenesis; and regulation of heart rate. Predicted to be integral component of membrane. Is expressed in several structures, including cardiovascular system; immature eye; mesoderm; nervous system; and pronephros. Human ortholog(s) of this gene implicated in Charcot-Marie-Tooth disease type 2DD. Orthologous to human ATP1A1 (ATPase Na+/K+ transporting subunit alpha 1).

GO:

id name namespace
GO:0006883 cellular sodium ion homeostasis biological_process
GO:1902600 proton transmembrane transport biological_process
GO:0007507 heart development biological_process
GO:0002027 regulation of heart rate biological_process
GO:0003143 embryonic heart tube morphogenesis biological_process
GO:0071599 otic vesicle development biological_process
GO:0021591 ventricular system development biological_process
GO:0036376 sodium ion export across plasma membrane biological_process
GO:0030198 extracellular matrix organization biological_process
GO:0035050 embryonic heart tube development biological_process
GO:0035051 cardiocyte differentiation biological_process
GO:0010172 embryonic body morphogenesis biological_process
GO:0048840 otolith development biological_process
GO:0060974 cell migration involved in heart formation biological_process
GO:0048854 brain morphogenesis biological_process
GO:0007368 determination of left/right symmetry biological_process
GO:0030007 cellular potassium ion homeostasis biological_process
GO:0008016 regulation of heart contraction biological_process
GO:0006811 ion transport biological_process
GO:0006813 potassium ion transport biological_process
GO:0007420 brain development biological_process
GO:1990573 potassium ion import across plasma membrane biological_process
GO:0030916 otic vesicle formation biological_process
GO:0030917 midbrain-hindbrain boundary development biological_process
GO:0005887 integral component of plasma membrane cellular_component
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0005391 sodium molecular_function
GO:0005524 ATP binding molecular_function
GO:0046872 metal ion binding molecular_function
GO:0000166 nucleotide binding molecular_function
GO:0008556 potassium transmembrane transporter activity, phosphorylative mechanism molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-001212-1 Enables P-type sodium:potassium-exchanging transporter activity. Acts upstream of or within several processes, including animal organ development; embryonic body morphogenesis; and regulation of heart rate. Predicted to be integral component of membrane. Is expressed in several structures, including cardiovascular system; immature eye; mesoderm; nervous system; and pronephros. Human ortholog(s) of this gene implicated in Charcot-Marie-Tooth disease type 2DD. Orthologous to human ATP1A1 (ATPase Na+/K+ transporting subunit alpha 1).
ZDB-GENE-001212-2 Predicted to enable P-type sodium:potassium-exchanging transporter activity. Acts upstream of or within semicircular canal morphogenesis. Predicted to be located in membrane. Predicted to be integral component of membrane. Is expressed in several structures, including immature eye; integument; intermediate mesoderm; nervous system; and yolk. Human ortholog(s) of this gene implicated in Charcot-Marie-Tooth disease type 2DD. Orthologous to human ATP1A1 (ATPase Na+/K+ transporting subunit alpha 1).

Ensembl:

ensembl_id ENSDARG00000002791 ENSDARG00000007739

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00000066 False 3506 mRNA 0.48 22 1712140 1731564
TCONS_00000067 False 652 processed_transcript 0.47 5 1712153 1718527
TCONS_00000068 False 867 processed_transcript 0.49 7 1717697 1723157
TCONS_00000069 False 313 processed_transcript 0.51 2 1718611 1793371
TCONS_00000070 False 416 processed_transcript 0.47 3 1719207 1732326
TCONS_00000071 False 772 lncRNA 0.43 2 1730392 1731484
TCONS_00000072 False 3232 mRNA 0.47 22 1789357 1796832
TCONS_00000073 True 479 lncRNA 0.46 2 1790772 1792523

Neighbor

gene id symbol gene type direction distance location
XLOC_000035 atp1a1a.4 coding upstream 5981 1689775 ~ 1706159 (+)
XLOC_000034 NA coding upstream 92826 1617203 ~ 1619314 (+)
XLOC_000033 urp2 coding upstream 97640 1599979 ~ 1614500 (+)
XLOC_000032 NA coding upstream 133889 1571847 ~ 1578251 (+)
XLOC_000031 NA coding upstream 351309 1358731 ~ 1360831 (+)
XLOC_000037 atp1a1a.3 coding downstream 8462 1805294 ~ 1815660 (+)
XLOC_000038 atp1a1a.5 coding downstream 41332 1838164 ~ 1850104 (+)
XLOC_000039 si:ch211-132g1.6 coding downstream 99905 1896737 ~ 1899848 (+)
XLOC_000040 si:ch211-132g1.4 coding downstream 107587 1904419 ~ 1911381 (+)
XLOC_000041 si:ch211-132g1.1 coding downstream 119135 1915967 ~ 1923253 (+)
XLOC_000030 NA non-coding upstream 369903 1315289 ~ 1342237 (+)
XLOC_000029 CR450787.2 non-coding upstream 493335 1218691 ~ 1218805 (+)
XLOC_000043 NA non-coding downstream 204884 2001716 ~ 2005632 (+)
XLOC_000044 NA non-coding downstream 226577 2023409 ~ 2023645 (+)
XLOC_000049 CR352215.1 non-coding downstream 478773 2275605 ~ 2275742 (+)
XLOC_000051 CR352215.2 non-coding downstream 606271 2403103 ~ 2403224 (+)
XLOC_000053 NA non-coding downstream 1921834 3718666 ~ 3720603 (+)

Expression


Co-expression Network