G1679786


Basic Information

Item Value
gene id G1679786
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 26995047 ~ 26996738 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1921591
cctgacgTTTGCTGGAtattcttgggcaccctgaagccttcttcacaacaattgaaccgctctacttaaagttcttgatgatctgataaatggttgatttaggtgcaatcttactggcagcaatatccttgcctgtgaagccctttctgtgcaaagcaatgatgacggcacgtgtttccttgcagataaccatggttgacagaggaagaacaatgattc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1921591 True 219 lncRNA 0.44 2 26995047 26996738

Neighbor

gene id symbol gene type direction distance location
LOC110499270 LOC106589653 coding upstream 16400 26973150 ~ 26978647 (+)
LOC110499269 LOC106589654 coding upstream 22555 26970021 ~ 26972492 (+)
dld LOC100380662 coding upstream 114779 26874466 ~ 26880268 (+)
si:zfos-1056e6.1 LOC105021192 coding upstream 192922 26795174 ~ 26802125 (+)
LOC110498782 LOC105021192 coding upstream 209881 26783110 ~ 26785166 (+)
LOC110499271 LOC106589655 coding downstream 8667 27005405 ~ 27012611 (+)
LOC110499272 rab4a coding downstream 65547 27062285 ~ 27068808 (+)
LOC110499274 urb2 coding downstream 103032 27099770 ~ 27132840 (+)
galnt2 LOC106589660 coding downstream 152655 27149393 ~ 27241856 (+)
cog2 cog2 coding downstream 284106 27280844 ~ 27292092 (+)
G1679307 NA non-coding upstream 13816 26981002 ~ 26981231 (+)
G1679285 NA non-coding upstream 35009 26959522 ~ 26960038 (+)
G1679280 NA non-coding upstream 63834 26930945 ~ 26931213 (+)
G1679269 NA non-coding upstream 76313 26918515 ~ 26918734 (+)
G1679227 NA non-coding upstream 138065 26856672 ~ 26856982 (+)
G1679815 NA non-coding downstream 35514 27032252 ~ 27032520 (+)
G1679810 NA non-coding downstream 42381 27039119 ~ 27039358 (+)
G1679829 NA non-coding downstream 47554 27044292 ~ 27044699 (+)
G1679832 NA non-coding downstream 49585 27046323 ~ 27046560 (+)
G1679833 NA non-coding downstream 51247 27047985 ~ 27050808 (+)
G1679135 NA other upstream 219367 26700392 ~ 26775680 (+)
LOC110499259 LOC106589644 other upstream 338936 26654584 ~ 26656111 (+)
LOC110499256 LOC106589642 other upstream 361849 26632095 ~ 26639269 (+)
G1678963 NA other upstream 527094 26462194 ~ 26467953 (+)
G1677738 NA other upstream 1353433 25636691 ~ 25641614 (+)
G1679823 NA other downstream 87688 27084426 ~ 27087463 (+)
G1680230 NA other downstream 378616 27375354 ~ 27375819 (+)
G1681180 NA other downstream 1720623 28717361 ~ 28726495 (+)
G1681792 NA other downstream 1781268 28778006 ~ 28778409 (+)
lhcgr lhr other downstream 2460490 29437357 ~ 29458499 (+)

Expression


Co-expression Network