Gene
RNA
| Item | Value |
|---|---|
| gene id | G1680392 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048584.1 |
| NCBI id | CM023238.2 |
| chromosome length | 46616863 |
| location | 27633695 ~ 27634069 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1922266 | True | 375 | lncRNA | 0.46 | 1 | 27633695 | 27634069 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| map3k21 | LOC106589668 | coding | upstream | 6910 | 27610623 ~ 27626785 (+) |
| rgs17 | LOC106589666 | coding | upstream | 99211 | 27494428 ~ 27534484 (+) |
| phactr2 | LOC106589662 | coding | upstream | 269592 | 27307243 ~ 27364103 (+) |
| cog2 | cog2 | coding | upstream | 341603 | 27280844 ~ 27292092 (+) |
| galnt2 | LOC106589660 | coding | upstream | 391839 | 27149393 ~ 27241856 (+) |
| LOC110499283 | LOC106589675 | coding | downstream | 42524 | 27676593 ~ 27683907 (+) |
| LOC100136337 | tnfaip3 | coding | downstream | 136673 | 27770742 ~ 27786519 (+) |
| arfgef3 | arfgef3 | coding | downstream | 180320 | 27814389 ~ 27858095 (+) |
| lhb | LOC100135809 | coding | downstream | 230799 | 27864868 ~ 27866512 (+) |
| adss2 | LOC106589688 | coding | downstream | 309698 | 27943767 ~ 27969322 (+) |
| G1680391 | NA | non-coding | upstream | 91 | 27633242 ~ 27633604 (+) |
| G1680228 | sf3b5 | non-coding | upstream | 249094 | 27381986 ~ 27384601 (+) |
| G1679967 | NA | non-coding | upstream | 318103 | 27315294 ~ 27315592 (+) |
| G1679957 | NA | non-coding | upstream | 332174 | 27301202 ~ 27301521 (+) |
| G1679956 | NA | non-coding | upstream | 332620 | 27300810 ~ 27301075 (+) |
| G1680393 | NA | non-coding | downstream | 582 | 27634651 ~ 27635105 (+) |
| G1680394 | NA | non-coding | downstream | 1732 | 27635801 ~ 27636483 (+) |
| G1680395 | NA | non-coding | downstream | 5270 | 27639339 ~ 27639804 (+) |
| G1680411 | NA | non-coding | downstream | 32312 | 27666381 ~ 27666624 (+) |
| G1680412 | NA | non-coding | downstream | 32703 | 27666772 ~ 27667080 (+) |
| G1680230 | NA | other | upstream | 257876 | 27375354 ~ 27375819 (+) |
| G1679823 | NA | other | upstream | 546232 | 27084426 ~ 27087463 (+) |
| G1679135 | NA | other | upstream | 858015 | 26700392 ~ 26775680 (+) |
| LOC110499259 | LOC106589644 | other | upstream | 977584 | 26654584 ~ 26656111 (+) |
| LOC110499256 | LOC106589642 | other | upstream | 1000497 | 26632095 ~ 26639269 (+) |
| G1681180 | NA | other | downstream | 1083292 | 28717361 ~ 28726495 (+) |
| G1681792 | NA | other | downstream | 1143937 | 28778006 ~ 28778409 (+) |
| lhcgr | lhr | other | downstream | 1823159 | 29437357 ~ 29458499 (+) |
| LOC110499316 | LOC106589729 | other | downstream | 1938366 | 29572397 ~ 29588171 (+) |
| G1686317 | LOC106589755 | other | downstream | 5020285 | 32654354 ~ 32661648 (+) |
