G1680611


Basic Information

Item Value
gene id G1680611
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 27708232 ~ 27708458 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1922508
gtccaactcatcccaaaccatctcaattgggttgaggtcgggggattgtggaggccaggtcatctgatgcagcactccctcactctccttcttggtcaaatagcccttacaccgcctggagatctgttgggtcattgtcctgttgaaaaacaaatgatagttccactaagcacaaaccaggtgggatggcatatcgctgcagaatgctgtggtagccatgctggtaa

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1922508 True 227 lncRNA 0.50 1 27708232 27708458

Neighbor

gene id symbol gene type direction distance location
LOC110499283 LOC106589675 coding upstream 24325 27676593 ~ 27683907 (+)
map3k21 LOC106589668 coding upstream 81447 27610623 ~ 27626785 (+)
rgs17 LOC106589666 coding upstream 173748 27494428 ~ 27534484 (+)
phactr2 LOC106589662 coding upstream 344129 27307243 ~ 27364103 (+)
cog2 cog2 coding upstream 416140 27280844 ~ 27292092 (+)
LOC100136337 tnfaip3 coding downstream 62284 27770742 ~ 27786519 (+)
arfgef3 arfgef3 coding downstream 105931 27814389 ~ 27858095 (+)
lhb LOC100135809 coding downstream 156410 27864868 ~ 27866512 (+)
adss2 LOC106589688 coding downstream 235309 27943767 ~ 27969322 (+)
akt3a LOC106589689 coding downstream 318831 28027289 ~ 28169772 (+)
G1680423 NA non-coding upstream 15092 27688971 ~ 27693140 (+)
G1680421 NA non-coding upstream 32952 27674929 ~ 27675280 (+)
G1680420 NA non-coding upstream 33748 27674040 ~ 27674484 (+)
G1680415 NA non-coding upstream 36975 27671021 ~ 27671257 (+)
G1680412 NA non-coding upstream 41152 27666772 ~ 27667080 (+)
G1680647 NA non-coding downstream 24891 27733349 ~ 27734096 (+)
G1680694 NA non-coding downstream 59160 27767618 ~ 27768095 (+)
G1680705 NA non-coding downstream 79077 27787535 ~ 27788023 (+)
G1680711 NA non-coding downstream 85745 27794203 ~ 27794710 (+)
G1680714 NA non-coding downstream 89545 27798003 ~ 27798398 (+)
G1680230 NA other upstream 332413 27375354 ~ 27375819 (+)
G1679823 NA other upstream 620769 27084426 ~ 27087463 (+)
G1679135 NA other upstream 932552 26700392 ~ 26775680 (+)
LOC110499259 LOC106589644 other upstream 1052121 26654584 ~ 26656111 (+)
LOC110499256 LOC106589642 other upstream 1075034 26632095 ~ 26639269 (+)
G1681180 NA other downstream 1008903 28717361 ~ 28726495 (+)
G1681792 NA other downstream 1069548 28778006 ~ 28778409 (+)
lhcgr lhr other downstream 1748770 29437357 ~ 29458499 (+)
LOC110499316 LOC106589729 other downstream 1863977 29572397 ~ 29588171 (+)
G1686317 LOC106589755 other downstream 4945896 32654354 ~ 32661648 (+)

Expression


Co-expression Network