G1681066


Basic Information

Item Value
gene id G1681066
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 28474929 ~ 28475246 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1922994
ctaagcatactgctaaatcagtagtttaaggggaaacatatccatgtcttggaatggcctagtcaaagcccagacatcaatccaattgagaatctgtggtatgacttaaagattgttgtacaccagcagaacccatccaacttgaaggagctggagcagttttgccttgaagaatgggcaaaaatcccagtggatagatgtgccaagcttatagagacatgccccaagagacttgcagctgtaattgctgcaaaagttggctctacaaagtattgactttgggtggGTGattagttatgcatgctcaagttttcattt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1922994 True 318 lncRNA 0.42 1 28474929 28475246

Neighbor

gene id symbol gene type direction distance location
abcg8 abcg8 coding upstream 143111 28316489 ~ 28331818 (+)
cep170aa cep170 coding upstream 181241 28225910 ~ 28293688 (+)
akt3a LOC106589689 coding upstream 305157 28027289 ~ 28169772 (+)
adss2 LOC106589688 coding upstream 505607 27943767 ~ 27969322 (+)
lhb LOC100135809 coding upstream 608417 27864868 ~ 27866512 (+)
ppm1ba ppm1b coding downstream 3554 28478800 ~ 28525093 (+)
slc3a1 slc3a1 coding downstream 50223 28525469 ~ 28534588 (+)
camkmt camkmt coding downstream 73247 28548493 ~ 28745581 (+)
six3a six3 coding downstream 373805 28849051 ~ 28852328 (+)
LOC110499307 NA coding downstream 416932 28892178 ~ 28936652 (+)
G1681062 NA non-coding upstream 3956 28470475 ~ 28470973 (+)
G1681035 NA non-coding upstream 4480 28469161 ~ 28470449 (+)
G1681025 NA non-coding upstream 66549 28408079 ~ 28408380 (+)
G1680703 NA non-coding upstream 173348 28299343 ~ 28301581 (+)
G1680975 NA non-coding upstream 198106 28276106 ~ 28276823 (+)
G1681090 NA non-coding downstream 62578 28537824 ~ 28544583 (+)
G1681137 NA non-coding downstream 162370 28637616 ~ 28638002 (+)
G1681162 NA non-coding downstream 213446 28688692 ~ 28729427 (+)
G1681791 NA non-coding downstream 302125 28777371 ~ 28777600 (+)
G1681797 NA non-coding downstream 309028 28784274 ~ 28784491 (+)
G1680230 NA other upstream 1099110 27375354 ~ 27375819 (+)
G1679823 NA other upstream 1387466 27084426 ~ 27087463 (+)
G1679135 NA other upstream 1699249 26700392 ~ 26775680 (+)
LOC110499259 LOC106589644 other upstream 1818818 26654584 ~ 26656111 (+)
LOC110499256 LOC106589642 other upstream 1841731 26632095 ~ 26639269 (+)
G1681180 NA other downstream 242115 28717361 ~ 28726495 (+)
G1681792 NA other downstream 302760 28778006 ~ 28778409 (+)
lhcgr lhr other downstream 981982 29437357 ~ 29458499 (+)
LOC110499316 LOC106589729 other downstream 1097189 29572397 ~ 29588171 (+)
G1686317 LOC106589755 other downstream 4179108 32654354 ~ 32661648 (+)

Expression


Co-expression Network