Gene
RNA
| Item | Value |
|---|---|
| gene id | G1681658 |
| gene name | NA |
| gene type | unknown |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048584.1 |
| NCBI id | CM023238.2 |
| chromosome length | 46616863 |
| location | 28535295 ~ 28535809 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Transposable element Tcb2 transposase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1923643 | True | 515 | TUCP | 0.46 | 1 | 28535295 | 28535809 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| lrpprc | lrpprc | coding | downstream | 128633 | 28333865 ~ 28406662 (-) |
| abcg5 | abcg5 | coding | downstream | 218875 | 28300705 ~ 28316420 (-) |
| sdccag8 | sdccag8 | coding | downstream | 309524 | 28173135 ~ 28225771 (-) |
| zbtb18 | zbtb18 | coding | downstream | 545480 | 27980723 ~ 27989815 (-) |
| desi2 | desi2 | coding | downstream | 616612 | 27873874 ~ 27918683 (-) |
| prepl | prepl | coding | upstream | 358 | 28536167 ~ 28548409 (-) |
| six2a | six2 | coding | upstream | 352439 | 28888248 ~ 28891585 (-) |
| LOC118941999 | NA | coding | upstream | 405337 | 28941146 ~ 28946739 (-) |
| srbd1 | srbd1 | coding | upstream | 490390 | 29026199 ~ 29123692 (-) |
| LOC110499311 | LOC106589723 | coding | upstream | 859975 | 29395784 ~ 29404585 (-) |
| G1681610 | NA | non-coding | downstream | 14220 | 28520637 ~ 28521075 (-) |
| G1681625 | NA | non-coding | downstream | 59780 | 28475307 ~ 28475515 (-) |
| G1681624 | LOC100136012 | non-coding | downstream | 61006 | 28474051 ~ 28474289 (-) |
| G1681585 | NA | non-coding | downstream | 116771 | 28418292 ~ 28418524 (-) |
| G1681582 | NA | non-coding | downstream | 120915 | 28414123 ~ 28414380 (-) |
| G1681687 | NA | non-coding | upstream | 51021 | 28586830 ~ 28587829 (-) |
| G1681690 | NA | non-coding | upstream | 57242 | 28593051 ~ 28593481 (-) |
| G1681703 | NA | non-coding | upstream | 105205 | 28641014 ~ 28642020 (-) |
| G1681731 | camkmt | non-coding | upstream | 162042 | 28697851 ~ 28711230 (-) |
| G1681798 | NA | non-coding | upstream | 248471 | 28784280 ~ 28784532 (-) |
| G1681623 | NA | other | downstream | 61270 | 28473285 ~ 28474025 (-) |
| fa36a | fa36a | other | downstream | 670467 | 27860741 ~ 27864828 (-) |
| LOC110499285 | olig3 | other | downstream | 784865 | 27748849 ~ 27750461 (-) |
| sf3b5 | sf3b5 | other | downstream | 1150687 | 27381985 ~ 27384608 (-) |
| G1680171 | cog2 | other | downstream | 1253687 | 27280823 ~ 27283995 (-) |
| LOC110499315 | LOC106589727 | other | upstream | 1005506 | 29541315 ~ 29571033 (-) |
| G1684661 | NA | other | upstream | 2575746 | 31111555 ~ 31113686 (-) |
| G1684920 | NA | other | upstream | 2871785 | 31407594 ~ 31412844 (-) |
| LOC110499342 | LOC106589762 | other | upstream | 4275898 | 32810995 ~ 32812999 (-) |
| G1686887 | NA | other | upstream | 4542001 | 33077810 ~ 33078027 (-) |
