G1681090


Basic Information

Item Value
gene id G1681090
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 28537824 ~ 28544583 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1923020
CCTACACTTCTAGCAACGATCTATTACAGCAGTCTCCTGAGGAACACACACTCCTCTAGTGGGACATGAATCTGACCACACTGCTGCTCTTCAGGAAGAACAAAACTATGGACAATTCTGGGATAATGAGCCTTCATTGGAATGTGCTTCTGGGTGGATGTGGTTGCTGGCTGAGATAGTGGGACCACCTGGAGTGCTAGCAGGCCTAAGGGGTCCCTGGTGGCCAACACACAGTGGTCCTGGAGCACCTCCATGTCCTTCACAGCTGTCCCA

Function

NR:

description
prolyl endopeptidase-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1923020 True 273 lncRNA 0.52 2 28537824 28544583

Neighbor

gene id symbol gene type direction distance location
slc3a1 slc3a1 coding upstream 3236 28525469 ~ 28534588 (+)
ppm1ba ppm1b coding upstream 12731 28478800 ~ 28525093 (+)
abcg8 abcg8 coding upstream 206006 28316489 ~ 28331818 (+)
cep170aa cep170 coding upstream 244136 28225910 ~ 28293688 (+)
akt3a LOC106589689 coding upstream 368052 28027289 ~ 28169772 (+)
camkmt camkmt coding downstream 3910 28548493 ~ 28745581 (+)
six3a six3 coding downstream 304468 28849051 ~ 28852328 (+)
LOC110499307 NA coding downstream 347595 28892178 ~ 28936652 (+)
LOC110499309 prkce coding downstream 583156 29127739 ~ 29280630 (+)
LOC110499310 epas1 coding downstream 741302 29285885 ~ 29356101 (+)
G1681066 NA non-coding upstream 62578 28474929 ~ 28475246 (+)
G1681062 NA non-coding upstream 66851 28470475 ~ 28470973 (+)
G1681035 NA non-coding upstream 67375 28469161 ~ 28470449 (+)
G1681025 NA non-coding upstream 129444 28408079 ~ 28408380 (+)
G1680703 NA non-coding upstream 236243 28299343 ~ 28301581 (+)
G1681137 NA non-coding downstream 93033 28637616 ~ 28638002 (+)
G1681162 NA non-coding downstream 144109 28688692 ~ 28729427 (+)
G1681791 NA non-coding downstream 232788 28777371 ~ 28777600 (+)
G1681797 NA non-coding downstream 239691 28784274 ~ 28784491 (+)
G1681820 NA non-coding downstream 264164 28808747 ~ 28809006 (+)
G1680230 NA other upstream 1162005 27375354 ~ 27375819 (+)
G1679823 NA other upstream 1450361 27084426 ~ 27087463 (+)
G1679135 NA other upstream 1762144 26700392 ~ 26775680 (+)
LOC110499259 LOC106589644 other upstream 1881713 26654584 ~ 26656111 (+)
LOC110499256 LOC106589642 other upstream 1904626 26632095 ~ 26639269 (+)
G1681180 NA other downstream 172778 28717361 ~ 28726495 (+)
G1681792 NA other downstream 233423 28778006 ~ 28778409 (+)
lhcgr lhr other downstream 912645 29437357 ~ 29458499 (+)
LOC110499316 LOC106589729 other downstream 1027852 29572397 ~ 29588171 (+)
G1686317 LOC106589755 other downstream 4109771 32654354 ~ 32661648 (+)

Expression


Co-expression Network