Gene
RNA
| Item | Value |
|---|---|
| gene id | G1681792 |
| gene name | NA |
| gene type | unknown |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048584.1 |
| NCBI id | CM023238.2 |
| chromosome length | 46616863 |
| location | 28778006 ~ 28778409 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1923788 | True | 404 | TUCP | 0.49 | 1 | 28778006 | 28778409 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| camkmt | camkmt | coding | upstream | 32425 | 28548493 ~ 28745581 (+) |
| slc3a1 | slc3a1 | coding | upstream | 243418 | 28525469 ~ 28534588 (+) |
| ppm1ba | ppm1b | coding | upstream | 252913 | 28478800 ~ 28525093 (+) |
| abcg8 | abcg8 | coding | upstream | 446188 | 28316489 ~ 28331818 (+) |
| cep170aa | cep170 | coding | upstream | 484318 | 28225910 ~ 28293688 (+) |
| six3a | six3 | coding | downstream | 70642 | 28849051 ~ 28852328 (+) |
| LOC110499307 | NA | coding | downstream | 113769 | 28892178 ~ 28936652 (+) |
| LOC110499309 | prkce | coding | downstream | 349330 | 29127739 ~ 29280630 (+) |
| LOC110499310 | epas1 | coding | downstream | 507476 | 29285885 ~ 29356101 (+) |
| trnaa-ugc-146 | NA | coding | downstream | 611911 | 29390320 ~ 29390393 (+) |
| G1681791 | NA | non-coding | upstream | 406 | 28777371 ~ 28777600 (+) |
| G1681162 | NA | non-coding | upstream | 48579 | 28688692 ~ 28729427 (+) |
| G1681137 | NA | non-coding | upstream | 140004 | 28637616 ~ 28638002 (+) |
| G1681090 | NA | non-coding | upstream | 233423 | 28537824 ~ 28544583 (+) |
| G1681066 | NA | non-coding | upstream | 302760 | 28474929 ~ 28475246 (+) |
| G1681797 | NA | non-coding | downstream | 5865 | 28784274 ~ 28784491 (+) |
| G1681820 | NA | non-coding | downstream | 30338 | 28808747 ~ 28809006 (+) |
| G1681835 | NA | non-coding | downstream | 50272 | 28828681 ~ 28828880 (+) |
| G1681846 | NA | non-coding | downstream | 56508 | 28834917 ~ 28835235 (+) |
| G1681870 | NA | non-coding | downstream | 77152 | 28855561 ~ 28855833 (+) |
| G1681180 | NA | other | upstream | 51511 | 28717361 ~ 28726495 (+) |
| G1680230 | NA | other | upstream | 1402187 | 27375354 ~ 27375819 (+) |
| G1679823 | NA | other | upstream | 1690543 | 27084426 ~ 27087463 (+) |
| G1679135 | NA | other | upstream | 2002326 | 26700392 ~ 26775680 (+) |
| LOC110499259 | LOC106589644 | other | upstream | 2121895 | 26654584 ~ 26656111 (+) |
| lhcgr | lhr | other | downstream | 678819 | 29437357 ~ 29458499 (+) |
| LOC110499316 | LOC106589729 | other | downstream | 794026 | 29572397 ~ 29588171 (+) |
| G1686317 | LOC106589755 | other | downstream | 3875945 | 32654354 ~ 32661648 (+) |
| LOC118942060 | LOC106589768 | other | downstream | 4398884 | 33177293 ~ 33196167 (+) |
| G1687675 | NA | other | downstream | 5547428 | 34325837 ~ 34326254 (+) |
