G1681797


Basic Information

Item Value
gene id G1681797
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 28784274 ~ 28784491 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1923793
cataagtattcagaccctttgctatgagactcgaaattgagctcgggtgcatcctgtttccattgatcatccttgagatgtctctacaacttgattggagtccacctgtagtaaattcaatttattggacatgatttggaaaggcacacacctgtctatataaggtcccacagttgacagtgtaagtcagagcaaaaaccaagccatgaggtcaaaga

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1923793 True 218 lncRNA 0.42 1 28784274 28784491

Neighbor

gene id symbol gene type direction distance location
camkmt camkmt coding upstream 38693 28548493 ~ 28745581 (+)
slc3a1 slc3a1 coding upstream 249686 28525469 ~ 28534588 (+)
ppm1ba ppm1b coding upstream 259181 28478800 ~ 28525093 (+)
abcg8 abcg8 coding upstream 452456 28316489 ~ 28331818 (+)
cep170aa cep170 coding upstream 490586 28225910 ~ 28293688 (+)
six3a six3 coding downstream 64560 28849051 ~ 28852328 (+)
LOC110499307 NA coding downstream 107687 28892178 ~ 28936652 (+)
LOC110499309 prkce coding downstream 343248 29127739 ~ 29280630 (+)
LOC110499310 epas1 coding downstream 501394 29285885 ~ 29356101 (+)
trnaa-ugc-146 NA coding downstream 605829 29390320 ~ 29390393 (+)
G1681791 NA non-coding upstream 6674 28777371 ~ 28777600 (+)
G1681162 NA non-coding upstream 54847 28688692 ~ 28729427 (+)
G1681137 NA non-coding upstream 146272 28637616 ~ 28638002 (+)
G1681090 NA non-coding upstream 239691 28537824 ~ 28544583 (+)
G1681066 NA non-coding upstream 309028 28474929 ~ 28475246 (+)
G1681820 NA non-coding downstream 24256 28808747 ~ 28809006 (+)
G1681835 NA non-coding downstream 44190 28828681 ~ 28828880 (+)
G1681846 NA non-coding downstream 50426 28834917 ~ 28835235 (+)
G1681870 NA non-coding downstream 71070 28855561 ~ 28855833 (+)
G1681897 NA non-coding downstream 91334 28875825 ~ 28876052 (+)
G1681792 NA other upstream 5865 28778006 ~ 28778409 (+)
G1681180 NA other upstream 57779 28717361 ~ 28726495 (+)
G1680230 NA other upstream 1408455 27375354 ~ 27375819 (+)
G1679823 NA other upstream 1696811 27084426 ~ 27087463 (+)
G1679135 NA other upstream 2008594 26700392 ~ 26775680 (+)
lhcgr lhr other downstream 672737 29437357 ~ 29458499 (+)
LOC110499316 LOC106589729 other downstream 787944 29572397 ~ 29588171 (+)
G1686317 LOC106589755 other downstream 3869863 32654354 ~ 32661648 (+)
LOC118942060 LOC106589768 other downstream 4392802 33177293 ~ 33196167 (+)
G1687675 NA other downstream 5541346 34325837 ~ 34326254 (+)

Expression


Co-expression Network