Gene
RNA
| Item | Value |
|---|---|
| gene id | G1682118 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048584.1 |
| NCBI id | CM023238.2 |
| chromosome length | 46616863 |
| location | 29110719 ~ 29111253 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1924137 | True | 213 | lncRNA | 0.49 | 2 | 29110719 | 29111253 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110499307 | NA | coding | upstream | 174067 | 28892178 ~ 28936652 (+) |
| six3a | six3 | coding | upstream | 258391 | 28849051 ~ 28852328 (+) |
| camkmt | camkmt | coding | upstream | 365138 | 28548493 ~ 28745581 (+) |
| slc3a1 | slc3a1 | coding | upstream | 576131 | 28525469 ~ 28534588 (+) |
| ppm1ba | ppm1b | coding | upstream | 585626 | 28478800 ~ 28525093 (+) |
| LOC110499309 | prkce | coding | downstream | 16486 | 29127739 ~ 29280630 (+) |
| LOC110499310 | epas1 | coding | downstream | 174632 | 29285885 ~ 29356101 (+) |
| trnaa-ugc-146 | NA | coding | downstream | 279067 | 29390320 ~ 29390393 (+) |
| ankrd1a | LOC106589708 | coding | downstream | 312441 | 29423694 ~ 29428859 (+) |
| lhcgr | lhr | coding | downstream | 326104 | 29437357 ~ 29458499 (+) |
| G1682072 | NA | non-coding | upstream | 59827 | 29047310 ~ 29050892 (+) |
| G1682067 | srbd1 | non-coding | upstream | 66977 | 29042149 ~ 29043742 (+) |
| G1682008 | NA | non-coding | upstream | 153973 | 28956527 ~ 28956746 (+) |
| G1682005 | NA | non-coding | upstream | 157182 | 28953331 ~ 28953537 (+) |
| G1682002 | NA | non-coding | upstream | 159211 | 28951270 ~ 28951508 (+) |
| G1682122 | NA | non-coding | downstream | 3601 | 29114854 ~ 29115245 (+) |
| G1682128 | NA | non-coding | downstream | 10592 | 29121845 ~ 29122528 (+) |
| G1682164 | NA | non-coding | downstream | 75528 | 29186781 ~ 29188592 (+) |
| G1682169 | NA | non-coding | downstream | 85399 | 29196652 ~ 29197180 (+) |
| G1682426 | NA | non-coding | downstream | 249480 | 29360733 ~ 29361016 (+) |
| G1681792 | NA | other | upstream | 332310 | 28778006 ~ 28778409 (+) |
| G1681180 | NA | other | upstream | 384224 | 28717361 ~ 28726495 (+) |
| G1680230 | NA | other | upstream | 1734900 | 27375354 ~ 27375819 (+) |
| G1679823 | NA | other | upstream | 2023256 | 27084426 ~ 27087463 (+) |
| G1679135 | NA | other | upstream | 2335039 | 26700392 ~ 26775680 (+) |
| LOC110499316 | LOC106589729 | other | downstream | 461182 | 29572397 ~ 29588171 (+) |
| G1686317 | LOC106589755 | other | downstream | 3543101 | 32654354 ~ 32661648 (+) |
| LOC118942060 | LOC106589768 | other | downstream | 4066040 | 33177293 ~ 33196167 (+) |
| G1687675 | NA | other | downstream | 5214584 | 34325837 ~ 34326254 (+) |
