Gene
RNA
| Item | Value |
|---|---|
| gene id | G1682569 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048584.1 |
| NCBI id | CM023238.2 |
| chromosome length | 46616863 |
| location | 29630942 ~ 29631154 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1924676 | True | 213 | lncRNA | 0.37 | 1 | 29630942 | 29631154 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110499316 | LOC106589729 | coding | upstream | 42771 | 29572397 ~ 29588171 (+) |
| tmem87b | LOC106589726 | coding | upstream | 94523 | 29510861 ~ 29536419 (+) |
| mertka | LOC106589725 | coding | upstream | 122646 | 29470031 ~ 29508296 (+) |
| lhcgr | lhr | coding | upstream | 172443 | 29437357 ~ 29458499 (+) |
| ankrd1a | LOC106589708 | coding | upstream | 202083 | 29423694 ~ 29428859 (+) |
| msh6 | msh6 | coding | downstream | 394471 | 30025625 ~ 30060187 (+) |
| LOC110499323 | ppp1r21 | coding | downstream | 563115 | 30194269 ~ 30217647 (+) |
| LOC110499324 | LOC106589740 | coding | downstream | 588632 | 30219786 ~ 30241466 (+) |
| LOC118942000 | NA | coding | downstream | 1809123 | 31440277 ~ 31440996 (+) |
| LOC110499596 | NA | coding | downstream | 1863940 | 31495094 ~ 31511177 (+) |
| G1682568 | NA | non-coding | upstream | 315 | 29630327 ~ 29630627 (+) |
| G1682566 | NA | non-coding | upstream | 2756 | 29627915 ~ 29628186 (+) |
| G1682560 | NA | non-coding | upstream | 16364 | 29614379 ~ 29614578 (+) |
| G1682549 | NA | non-coding | upstream | 22356 | 29603733 ~ 29608586 (+) |
| G1682556 | NA | non-coding | upstream | 28989 | 29601727 ~ 29601953 (+) |
| G1682671 | NA | non-coding | downstream | 146473 | 29777627 ~ 29778080 (+) |
| G1682761 | NA | non-coding | downstream | 275719 | 29906873 ~ 29907283 (+) |
| G1682759 | NA | non-coding | downstream | 356949 | 29988103 ~ 29988921 (+) |
| G1682751 | NA | non-coding | downstream | 477557 | 30108711 ~ 30132886 (+) |
| G1682915 | NA | non-coding | downstream | 570107 | 30201261 ~ 30212674 (+) |
| G1681792 | NA | other | upstream | 852533 | 28778006 ~ 28778409 (+) |
| G1681180 | NA | other | upstream | 904447 | 28717361 ~ 28726495 (+) |
| G1680230 | NA | other | upstream | 2255123 | 27375354 ~ 27375819 (+) |
| G1686317 | LOC106589755 | other | downstream | 3023200 | 32654354 ~ 32661648 (+) |
| LOC118942060 | LOC106589768 | other | downstream | 3546139 | 33177293 ~ 33196167 (+) |
| G1687675 | NA | other | downstream | 4694683 | 34325837 ~ 34326254 (+) |
| LOC110499396 | LOC106589821 | other | downstream | 5750555 | 35381609 ~ 35384567 (+) |
| G1689347 | NA | other | downstream | 6050213 | 35681367 ~ 35682437 (+) |
