Gene
RNA
| Item | Value |
|---|---|
| gene id | G1683407 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048584.1 |
| NCBI id | CM023238.2 |
| chromosome length | 46616863 |
| location | 29958050 ~ 29961061 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1925610 | True | 337 | lncRNA | 0.37 | 2 | 29958050 | 29961061 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| golga4 | golga4 | coding | downstream | 156213 | 29747225 ~ 29801837 (-) |
| itga9 | LOC106589731 | coding | downstream | 211722 | 29606706 ~ 29746328 (-) |
| LOC110499317 | LOC106589730 | coding | downstream | 357228 | 29587563 ~ 29600822 (-) |
| LOC110499315 | LOC106589727 | coding | downstream | 387017 | 29541315 ~ 29571033 (-) |
| LOC110499311 | LOC106589723 | coding | downstream | 553465 | 29395784 ~ 29404585 (-) |
| fbxo11a | fbxo11 | coding | upstream | 99065 | 30060126 ~ 30093714 (-) |
| foxn2a | foxn2 | coding | upstream | 147621 | 30108682 ~ 30158650 (-) |
| LOC110498786 | LOC106589743 | coding | upstream | 310918 | 30271979 ~ 30309264 (-) |
| LOC110498787 | nrxn1 | coding | upstream | 647505 | 30608566 ~ 31165271 (-) |
| LOC110499326 | LOC106589746 | coding | upstream | 1773795 | 31734856 ~ 31806658 (-) |
| G1683269 | NA | non-coding | downstream | 249434 | 29708164 ~ 29708616 (-) |
| G1683252 | NA | non-coding | downstream | 358644 | 29599143 ~ 29599406 (-) |
| G1683251 | NA | non-coding | downstream | 359022 | 29598742 ~ 29599028 (-) |
| G1683225 | NA | non-coding | downstream | 421661 | 29533652 ~ 29536389 (-) |
| G1683188 | LOC106589725 | non-coding | downstream | 449789 | 29506532 ~ 29508261 (-) |
| G1683486 | NA | non-coding | upstream | 141279 | 30102340 ~ 30103392 (-) |
| G1683532 | NA | non-coding | upstream | 253432 | 30214493 ~ 30217636 (-) |
| G1683540 | NA | non-coding | upstream | 260311 | 30221372 ~ 30233412 (-) |
| G1683690 | NA | non-coding | upstream | 484827 | 30445888 ~ 30446190 (-) |
| G1683701 | NA | non-coding | upstream | 492889 | 30453950 ~ 30454197 (-) |
| G1681658 | NA | other | downstream | 1422241 | 28535295 ~ 28535809 (-) |
| G1681623 | NA | other | downstream | 1484025 | 28473285 ~ 28474025 (-) |
| fa36a | fa36a | other | downstream | 2093222 | 27860741 ~ 27864828 (-) |
| LOC110499285 | olig3 | other | downstream | 2207620 | 27748849 ~ 27750461 (-) |
| G1684661 | NA | other | upstream | 1150494 | 31111555 ~ 31113686 (-) |
| G1684920 | NA | other | upstream | 1446533 | 31407594 ~ 31412844 (-) |
| LOC110499342 | LOC106589762 | other | upstream | 2850646 | 32810995 ~ 32812999 (-) |
| G1686887 | NA | other | upstream | 3116749 | 33077810 ~ 33078027 (-) |
| LOC110499358 | LOC106589782 | other | upstream | 3572612 | 33530945 ~ 33535225 (-) |
