G1682759


Basic Information

Item Value
gene id G1682759
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 29988103 ~ 29988921 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1924884
TCTGTGATCTCCTTCACTTGTTTGGCTCTGTGGAAAATGCTTATTTAGGAATACAGCTTTATTATTCTAAAACAATAAGCTTTATGTAACCTATCCAATTCTATTCTGGCTTTGGTAGCACAATTTAATTTCTTCCAAATGACTTCATGTGTCAAAATGTCTCAAACTATGCTTACAGggacaatctgcagttcaaacaacaacaatgccaaagacacacacagacagtatgtCTAgaaccagcctggtctcatagactagacgtaacatagtaaatgtaaatcccgGACACTCAAATtgttatgatatgttacatttagTATGGTTGCATTAGACAGAACTctctgggcacacactggttaaatCAGAGTTGTTTCCGCATAATTTCTGTCACGctttgatctgtttcacctgtccttgtgattgtctccaccccctccaggtgtcgcttattttccccagtgtatttatccctgtgtttcctgtctctctgtgccagtttgtcttgtatgtttccaagtcaaccagcgggttttcccgttctccttttttttttgttttttttgttgcaattcttctttttctagtcctcccagttttgacccttgactgtttctggactctgtacccgcctgtatgccactctgtacctcctggactctgtacccgcctgtatgccactctgtaccttctggactctgtacccgcctgtctgccactctgtacctcctggactctgaactggttttgaccttttgcctgtccacgcccattctcttgc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1924884 True 781 lncRNA 0.43 2 29988103 29988921

Neighbor

gene id symbol gene type direction distance location
LOC110499316 LOC106589729 coding upstream 399932 29572397 ~ 29588171 (+)
tmem87b LOC106589726 coding upstream 451684 29510861 ~ 29536419 (+)
mertka LOC106589725 coding upstream 479807 29470031 ~ 29508296 (+)
lhcgr lhr coding upstream 529604 29437357 ~ 29458499 (+)
ankrd1a LOC106589708 coding upstream 559244 29423694 ~ 29428859 (+)
msh6 msh6 coding downstream 36704 30025625 ~ 30060187 (+)
LOC110499323 ppp1r21 coding downstream 205348 30194269 ~ 30217647 (+)
LOC110499324 LOC106589740 coding downstream 230865 30219786 ~ 30241466 (+)
LOC118942000 NA coding downstream 1451356 31440277 ~ 31440996 (+)
LOC110499596 NA coding downstream 1506173 31495094 ~ 31511177 (+)
G1682761 NA non-coding upstream 80820 29906873 ~ 29907283 (+)
G1682671 NA non-coding upstream 210023 29777627 ~ 29778080 (+)
G1682569 NA non-coding upstream 356949 29630942 ~ 29631154 (+)
G1682568 NA non-coding upstream 357476 29630327 ~ 29630627 (+)
G1682566 NA non-coding upstream 359917 29627915 ~ 29628186 (+)
G1682751 NA non-coding downstream 119790 30108711 ~ 30132886 (+)
G1682915 NA non-coding downstream 212340 30201261 ~ 30212674 (+)
G1683718 NA non-coding downstream 476011 30464932 ~ 30465276 (+)
G1683787 NA non-coding downstream 523114 30512035 ~ 30512248 (+)
G1683800 NA non-coding downstream 535475 30524396 ~ 30524636 (+)
G1681792 NA other upstream 1209694 28778006 ~ 28778409 (+)
G1681180 NA other upstream 1261608 28717361 ~ 28726495 (+)
G1680230 NA other upstream 2612284 27375354 ~ 27375819 (+)
G1686317 LOC106589755 other downstream 2665433 32654354 ~ 32661648 (+)
LOC118942060 LOC106589768 other downstream 3188372 33177293 ~ 33196167 (+)
G1687675 NA other downstream 4336916 34325837 ~ 34326254 (+)
LOC110499396 LOC106589821 other downstream 5392788 35381609 ~ 35384567 (+)
G1689347 NA other downstream 5692446 35681367 ~ 35682437 (+)

Expression


Co-expression Network