G1683787


Basic Information

Item Value
gene id G1683787
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 30512035 ~ 30512248 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1926010
gaaaataagtatttggtcaataacaaaagtttatctcaatactttgttatataccctttgttggcaatgacagaggtcaaacgatttctgtaagtcttcacaaggttttcacacactgttgctggtattttggcccattcctccatgcagatctcctctagagcagtgatgttttggggctgttgctgggcaacacggactttcaactccctcc

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1926010 True 214 lncRNA 0.42 1 30512035 30512248

Neighbor

gene id symbol gene type direction distance location
LOC110499324 LOC106589740 coding upstream 270569 30219786 ~ 30241466 (+)
LOC110499323 ppp1r21 coding upstream 294388 30194269 ~ 30217647 (+)
msh6 msh6 coding upstream 451848 30025625 ~ 30060187 (+)
LOC110499316 LOC106589729 coding upstream 923864 29572397 ~ 29588171 (+)
tmem87b LOC106589726 coding upstream 975616 29510861 ~ 29536419 (+)
LOC118942000 NA coding downstream 928029 31440277 ~ 31440996 (+)
LOC110499596 NA coding downstream 982846 31495094 ~ 31511177 (+)
erlec1 LOC106589745 coding downstream 1201458 31713706 ~ 31725878 (+)
wdr27 wdr27 coding downstream 1310512 31822760 ~ 31978074 (+)
thbs2a thbs2 coding downstream 1521951 32034199 ~ 32073088 (+)
G1683718 NA non-coding upstream 46759 30464932 ~ 30465276 (+)
G1682915 NA non-coding upstream 299361 30201261 ~ 30212674 (+)
G1682751 NA non-coding upstream 379149 30108711 ~ 30132886 (+)
G1682759 NA non-coding upstream 523114 29988103 ~ 29988921 (+)
G1682761 NA non-coding upstream 604752 29906873 ~ 29907283 (+)
G1683800 NA non-coding downstream 12148 30524396 ~ 30524636 (+)
G1683802 NA non-coding downstream 12908 30525156 ~ 30525418 (+)
G1683804 NA non-coding downstream 13210 30525458 ~ 30525751 (+)
G1683805 NA non-coding downstream 14195 30526443 ~ 30526763 (+)
G1683825 NA non-coding downstream 25611 30537859 ~ 30538186 (+)
lhcgr lhr other upstream 1054114 29437357 ~ 29458499 (+)
G1681792 NA other upstream 1733626 28778006 ~ 28778409 (+)
G1681180 NA other upstream 1785540 28717361 ~ 28726495 (+)
G1680230 NA other upstream 3136216 27375354 ~ 27375819 (+)
G1686317 LOC106589755 other downstream 2142106 32654354 ~ 32661648 (+)
LOC118942060 LOC106589768 other downstream 2665045 33177293 ~ 33196167 (+)
G1687675 NA other downstream 3813589 34325837 ~ 34326254 (+)
LOC110499396 LOC106589821 other downstream 4869461 35381609 ~ 35384567 (+)
G1689347 NA other downstream 5169119 35681367 ~ 35682437 (+)

Expression


Co-expression Network