G1683825


Basic Information

Item Value
gene id G1683825
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 30537859 ~ 30538186 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1926048
ccctacacccactccaatttgctttccgccccaataggtccacagatgacgcaatcgcaaccacactgcacactgccctaacccatctggacaagaggaacttgacttcctgacgggccgcccccaggtggtgagggtaggtaacaacatctccaccccgctgatcctcaacactggggccccacaagggtgcgttctgagccctctcctgtactccctgttcacccacgactgcgtggccatgcacgcctccaactcaatcatcaagtttgcagacgacactacagtggtaggcttgattaccaacaacaacgagacggcctacagg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1926048 True 328 lncRNA 0.57 1 30537859 30538186

Neighbor

gene id symbol gene type direction distance location
LOC110499324 LOC106589740 coding upstream 296393 30219786 ~ 30241466 (+)
LOC110499323 ppp1r21 coding upstream 320212 30194269 ~ 30217647 (+)
msh6 msh6 coding upstream 477672 30025625 ~ 30060187 (+)
LOC110499316 LOC106589729 coding upstream 949688 29572397 ~ 29588171 (+)
tmem87b LOC106589726 coding upstream 1001440 29510861 ~ 29536419 (+)
LOC118942000 NA coding downstream 902091 31440277 ~ 31440996 (+)
LOC110499596 NA coding downstream 956908 31495094 ~ 31511177 (+)
erlec1 LOC106589745 coding downstream 1175520 31713706 ~ 31725878 (+)
wdr27 wdr27 coding downstream 1284574 31822760 ~ 31978074 (+)
thbs2a thbs2 coding downstream 1496013 32034199 ~ 32073088 (+)
G1683805 NA non-coding upstream 11096 30526443 ~ 30526763 (+)
G1683804 NA non-coding upstream 12108 30525458 ~ 30525751 (+)
G1683802 NA non-coding upstream 12441 30525156 ~ 30525418 (+)
G1683800 NA non-coding upstream 13223 30524396 ~ 30524636 (+)
G1683787 NA non-coding upstream 25611 30512035 ~ 30512248 (+)
G1683827 NA non-coding downstream 746 30538932 ~ 30539151 (+)
G1683833 NA non-coding downstream 2460 30540646 ~ 30540958 (+)
G1683850 NA non-coding downstream 14675 30552861 ~ 30553144 (+)
G1683872 NA non-coding downstream 27670 30565856 ~ 30573073 (+)
G1683887 NA non-coding downstream 38821 30577007 ~ 30577466 (+)
lhcgr lhr other upstream 1079938 29437357 ~ 29458499 (+)
G1681792 NA other upstream 1759450 28778006 ~ 28778409 (+)
G1681180 NA other upstream 1811364 28717361 ~ 28726495 (+)
G1680230 NA other upstream 3162040 27375354 ~ 27375819 (+)
G1686317 LOC106589755 other downstream 2116168 32654354 ~ 32661648 (+)
LOC118942060 LOC106589768 other downstream 2639107 33177293 ~ 33196167 (+)
G1687675 NA other downstream 3787651 34325837 ~ 34326254 (+)
LOC110499396 LOC106589821 other downstream 4843523 35381609 ~ 35384567 (+)
G1689347 NA other downstream 5143181 35681367 ~ 35682437 (+)

Expression


Co-expression Network