Gene
RNA
| Item | Value |
|---|---|
| gene id | G1683899 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048584.1 |
| NCBI id | CM023238.2 |
| chromosome length | 46616863 |
| location | 30582817 ~ 30583034 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1926123 | True | 218 | lncRNA | 0.34 | 1 | 30582817 | 30583034 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110498786 | LOC106589743 | coding | downstream | 273553 | 30271979 ~ 30309264 (-) |
| foxn2a | foxn2 | coding | downstream | 424167 | 30108682 ~ 30158650 (-) |
| fbxo11a | fbxo11 | coding | downstream | 489103 | 30060126 ~ 30093714 (-) |
| golga4 | golga4 | coding | downstream | 780980 | 29747225 ~ 29801837 (-) |
| itga9 | LOC106589731 | coding | downstream | 836489 | 29606706 ~ 29746328 (-) |
| LOC110498787 | nrxn1 | coding | upstream | 25532 | 30608566 ~ 31165271 (-) |
| LOC110499326 | LOC106589746 | coding | upstream | 1151822 | 31734856 ~ 31806658 (-) |
| LOC110499330 | LOC106589750 | coding | upstream | 1560475 | 32143509 ~ 32226222 (-) |
| LOC110499332 | LOC106588150 | coding | upstream | 1571903 | 32154937 ~ 32158796 (-) |
| LOC118942460 | NA | coding | upstream | 1919095 | 32502129 ~ 32502308 (-) |
| G1683890 | NA | non-coding | downstream | 3780 | 30578787 ~ 30579037 (-) |
| G1683868 | NA | non-coding | downstream | 21279 | 30561332 ~ 30561538 (-) |
| G1683861 | NA | non-coding | downstream | 24201 | 30558404 ~ 30558616 (-) |
| G1683815 | NA | non-coding | downstream | 50939 | 30531660 ~ 30531878 (-) |
| G1683806 | NA | non-coding | downstream | 55935 | 30526545 ~ 30526882 (-) |
| G1683904 | NA | non-coding | upstream | 1763 | 30584797 ~ 30585016 (-) |
| G1684390 | NA | non-coding | upstream | 54248 | 30637282 ~ 30637712 (-) |
| G1684504 | NA | non-coding | upstream | 242765 | 30825799 ~ 30827619 (-) |
| G1684507 | NA | non-coding | upstream | 252601 | 30835635 ~ 30836013 (-) |
| G1684526 | NA | non-coding | upstream | 293476 | 30876510 ~ 30876803 (-) |
| LOC110499315 | LOC106589727 | other | downstream | 1036500 | 29541315 ~ 29571033 (-) |
| G1681658 | NA | other | downstream | 2047008 | 28535295 ~ 28535809 (-) |
| G1681623 | NA | other | downstream | 2108792 | 28473285 ~ 28474025 (-) |
| fa36a | fa36a | other | downstream | 2717989 | 27860741 ~ 27864828 (-) |
| LOC110499285 | olig3 | other | downstream | 2832387 | 27748849 ~ 27750461 (-) |
| G1684661 | NA | other | upstream | 528521 | 31111555 ~ 31113686 (-) |
| G1684920 | NA | other | upstream | 824560 | 31407594 ~ 31412844 (-) |
| LOC110499342 | LOC106589762 | other | upstream | 2228673 | 32810995 ~ 32812999 (-) |
| G1686887 | NA | other | upstream | 2494776 | 33077810 ~ 33078027 (-) |
| LOC110499358 | LOC106589782 | other | upstream | 2950639 | 33530945 ~ 33535225 (-) |
