G1684646


Basic Information

Item Value
gene id G1684646
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 31083748 ~ 31085290 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1926989
CCTAATTAGAGtcaactaatggacaacaacacttaggcttctacttccagtttttacatactatatacattttacagacacagtacattttacatgtatttatcttttgtttgtttttagtcccagccttcagctcccctcaacgcctcccatctatctctgaacaccacccagtcccagccttcagctcccctcaacgcctcccatctatctctgaacaccatccagtcccagccttcagctcccctcaatgcctcccatctatctctgaacaccatccagtcccagccttcagctcccctcaacacctcccatctatctctgaacaccatccagtcccagccttcagctcccctcaacgcctcccatctatctctgaacaccatccagtcccagccttcagctcccctcaacgcctcccatctatctctgaacaccatccagtcccagccttcagctcccctcaacgcctcccatctatctctgaacaccatccagtcccagccttcaacTCCCCTCAacgcctcccatctatctctgaacaccatccagtcccagccttcagctcccctcaacgcctcccatctatctctgaacaccatccagtcccatccttcagctcccctcaacgcctcccatctatctctgaacaccatccagtcccagccttcagctcccctcaatgcatcccatctatctctgaacaccatccagtcccagccttcagctcccctcaacccctcccatctatctctgaacaccatccagtcccagccttcagctcccctcaacccctcccatctatctctgaacaccatccagtcccagccttcagctcccctcaacgcctcccatctatctctgaacaccatccagtcccagccttcagctcccctcaatgcatcccatctatctctgaacaccatccagtcccagccttcagctcccctcaacccctcccatctatctctgaacaccatccagtcccagccttcagctcccctcaacccctcccatctatctctgaacaccatccagtcccagccttcagctcccctcaacctctcccatctgtctctgaacaccatccagtcccagccttcagctcccctcaatgcctcccatctatctctgaacaccatccagtcccagccttcagctcccctcaacccctcccatatgtctctgaacaccatccagtcccagccttcagcacCCCTCAacgcctcccatctatctctgaacaccatccagtcccagccttcagcacCCC

Function

NR:

description
PREDICTED: suprabasin

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1926989 True 1273 lncRNA 0.54 2 31083748 31085290

Neighbor

gene id symbol gene type direction distance location
LOC110498786 LOC106589743 coding downstream 774484 30271979 ~ 30309264 (-)
foxn2a foxn2 coding downstream 925098 30108682 ~ 30158650 (-)
fbxo11a fbxo11 coding downstream 990034 30060126 ~ 30093714 (-)
golga4 golga4 coding downstream 1281911 29747225 ~ 29801837 (-)
itga9 LOC106589731 coding downstream 1337420 29606706 ~ 29746328 (-)
LOC110499326 LOC106589746 coding upstream 649566 31734856 ~ 31806658 (-)
LOC110499330 LOC106589750 coding upstream 1058219 32143509 ~ 32226222 (-)
LOC110499332 LOC106588150 coding upstream 1069647 32154937 ~ 32158796 (-)
LOC118942460 NA coding upstream 1416839 32502129 ~ 32502308 (-)
LOC118942014 NA coding upstream 1569667 32654957 ~ 32656185 (-)
G1684590 NA non-coding downstream 38847 30989610 ~ 31044901 (-)
G1684565 NA non-coding downstream 127725 30936633 ~ 30956023 (-)
G1684526 NA non-coding downstream 206945 30876510 ~ 30876803 (-)
G1684507 NA non-coding downstream 247735 30835635 ~ 30836013 (-)
G1684504 NA non-coding downstream 256129 30825799 ~ 30827619 (-)
G1684657 NA non-coding upstream 15152 31100442 ~ 31100817 (-)
G1684705 NA non-coding upstream 111825 31197115 ~ 31197863 (-)
G1684715 NA non-coding upstream 133197 31218487 ~ 31255183 (-)
G1684784 NA non-coding upstream 225465 31310755 ~ 31311415 (-)
G1684785 NA non-coding upstream 226314 31311604 ~ 31311813 (-)
LOC110499315 LOC106589727 other downstream 1537431 29541315 ~ 29571033 (-)
G1681658 NA other downstream 2547939 28535295 ~ 28535809 (-)
G1681623 NA other downstream 2609723 28473285 ~ 28474025 (-)
fa36a fa36a other downstream 3218920 27860741 ~ 27864828 (-)
LOC110499285 olig3 other downstream 3333318 27748849 ~ 27750461 (-)
G1684661 NA other upstream 26265 31111555 ~ 31113686 (-)
G1684920 NA other upstream 322304 31407594 ~ 31412844 (-)
LOC110499342 LOC106589762 other upstream 1726417 32810995 ~ 32812999 (-)
G1686887 NA other upstream 1992520 33077810 ~ 33078027 (-)
LOC110499358 LOC106589782 other upstream 2448383 33530945 ~ 33535225 (-)

Expression


Co-expression Network