G1684946


Basic Information

Item Value
gene id G1684946
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 31436253 ~ 31436493 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1927304
acacaaaatagtccaaattggtgaagtgaaaaaaaatatGCTTGTTTCAAACAATTTGAAAAAATAACAATCGGAAAAGTTgcgcgtgcatatgtattcaccccctttgctatgaagcccctaaataacatctggtgcaaccaattaccttcataaatcacataattagttcaataaattccacctgtgtgcaatctatgtgtcacatgatctgtcacatgatctcaggaaatatatatac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1927304 True 241 lncRNA 0.34 1 31436253 31436493

Neighbor

gene id symbol gene type direction distance location
LOC110499324 LOC106589740 coding upstream 1194787 30219786 ~ 30241466 (+)
LOC110499323 ppp1r21 coding upstream 1218606 30194269 ~ 30217647 (+)
msh6 msh6 coding upstream 1376066 30025625 ~ 30060187 (+)
LOC110499316 LOC106589729 coding upstream 1848082 29572397 ~ 29588171 (+)
tmem87b LOC106589726 coding upstream 1899834 29510861 ~ 29536419 (+)
LOC118942000 NA coding downstream 3784 31440277 ~ 31440996 (+)
LOC110499596 NA coding downstream 58601 31495094 ~ 31511177 (+)
erlec1 LOC106589745 coding downstream 277213 31713706 ~ 31725878 (+)
wdr27 wdr27 coding downstream 386267 31822760 ~ 31978074 (+)
thbs2a thbs2 coding downstream 597706 32034199 ~ 32073088 (+)
G1684937 NA non-coding upstream 5442 31430597 ~ 31430811 (+)
G1684881 NA non-coding upstream 50978 31384983 ~ 31385275 (+)
G1684866 NA non-coding upstream 63680 31372290 ~ 31372573 (+)
G1684835 NA non-coding upstream 89403 31346574 ~ 31346850 (+)
G1684821 NA non-coding upstream 97415 31338312 ~ 31338838 (+)
G1685047 NA non-coding downstream 83932 31520425 ~ 31520782 (+)
G1685172 NA non-coding downstream 167716 31604209 ~ 31604473 (+)
G1685173 NA non-coding downstream 168094 31604587 ~ 31604907 (+)
G1685201 NA non-coding downstream 190995 31627488 ~ 31627715 (+)
G1685202 NA non-coding downstream 191390 31627883 ~ 31628106 (+)
lhcgr lhr other upstream 1978332 29437357 ~ 29458499 (+)
G1681792 NA other upstream 2657844 28778006 ~ 28778409 (+)
G1681180 NA other upstream 2709758 28717361 ~ 28726495 (+)
G1680230 NA other upstream 4060434 27375354 ~ 27375819 (+)
G1686317 LOC106589755 other downstream 1217861 32654354 ~ 32661648 (+)
LOC118942060 LOC106589768 other downstream 1740800 33177293 ~ 33196167 (+)
G1687675 NA other downstream 2889344 34325837 ~ 34326254 (+)
LOC110499396 LOC106589821 other downstream 3945216 35381609 ~ 35384567 (+)
G1689347 NA other downstream 4244874 35681367 ~ 35682437 (+)

Expression


Co-expression Network