Gene
RNA
| Item | Value |
|---|---|
| gene id | G1684948 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048584.1 |
| NCBI id | CM023238.2 |
| chromosome length | 46616863 |
| location | 31436508 ~ 31436797 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: high mobility group protein B2 isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1927306 | True | 290 | lncRNA | 0.49 | 1 | 31436508 | 31436797 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110498787 | nrxn1 | coding | downstream | 271237 | 30608566 ~ 31165271 (-) |
| LOC110498786 | LOC106589743 | coding | downstream | 1127244 | 30271979 ~ 30309264 (-) |
| foxn2a | foxn2 | coding | downstream | 1277858 | 30108682 ~ 30158650 (-) |
| fbxo11a | fbxo11 | coding | downstream | 1342794 | 30060126 ~ 30093714 (-) |
| golga4 | golga4 | coding | downstream | 1634671 | 29747225 ~ 29801837 (-) |
| LOC110499326 | LOC106589746 | coding | upstream | 298059 | 31734856 ~ 31806658 (-) |
| LOC110499330 | LOC106589750 | coding | upstream | 706712 | 32143509 ~ 32226222 (-) |
| LOC110499332 | LOC106588150 | coding | upstream | 718140 | 32154937 ~ 32158796 (-) |
| LOC118942460 | NA | coding | upstream | 1065332 | 32502129 ~ 32502308 (-) |
| LOC118942014 | NA | coding | upstream | 1218160 | 32654957 ~ 32656185 (-) |
| G1684882 | NA | non-coding | downstream | 51285 | 31384918 ~ 31385223 (-) |
| G1684874 | NA | non-coding | downstream | 56840 | 31379464 ~ 31379668 (-) |
| G1684868 | NA | non-coding | downstream | 62088 | 31374183 ~ 31374420 (-) |
| G1684867 | NA | non-coding | downstream | 64051 | 31372237 ~ 31372457 (-) |
| G1684865 | NA | non-coding | downstream | 64852 | 31371367 ~ 31371656 (-) |
| G1685052 | NA | non-coding | upstream | 85680 | 31522477 ~ 31522703 (-) |
| G1685164 | NA | non-coding | upstream | 161718 | 31598515 ~ 31598815 (-) |
| G1685178 | NA | non-coding | upstream | 169298 | 31606095 ~ 31606414 (-) |
| G1685180 | NA | non-coding | upstream | 170621 | 31607418 ~ 31607644 (-) |
| G1685182 | NA | non-coding | upstream | 174659 | 31611456 ~ 31612827 (-) |
| G1684920 | NA | other | downstream | 23664 | 31407594 ~ 31412844 (-) |
| G1684661 | NA | other | downstream | 322822 | 31111555 ~ 31113686 (-) |
| LOC110499315 | LOC106589727 | other | downstream | 1890191 | 29541315 ~ 29571033 (-) |
| G1681658 | NA | other | downstream | 2900699 | 28535295 ~ 28535809 (-) |
| G1681623 | NA | other | downstream | 2962483 | 28473285 ~ 28474025 (-) |
| LOC110499342 | LOC106589762 | other | upstream | 1374910 | 32810995 ~ 32812999 (-) |
| G1686887 | NA | other | upstream | 1641013 | 33077810 ~ 33078027 (-) |
| LOC110499358 | LOC106589782 | other | upstream | 2096876 | 33530945 ~ 33535225 (-) |
| G1687007 | LOC106589782 | other | upstream | 2106889 | 33531084 ~ 33544238 (-) |
| G1689130 | NA | other | upstream | 3822192 | 35258989 ~ 35259818 (-) |
