G1685281


Basic Information

Item Value
gene id G1685281
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 31708945 ~ 31709162 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1927652
gtatgatagtgggtgccaggcgcaccgatgTGTGTCAAGAACGGCACCgctgctcaacagtttcccgtgtgtattaagaatggtccaccacccaaaggacatccagacagtTTGACGAAACTGTGGGACAATACACAACTATACATTTctgtgtcaccagaggattttagctCCACAAATAAATTATTactgtattagtgatttaaataccTGGATGG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1927652 True 218 lncRNA 0.44 1 31708945 31709162

Neighbor

gene id symbol gene type direction distance location
LOC110499596 NA coding upstream 197768 31495094 ~ 31511177 (+)
LOC118942000 NA coding upstream 267949 31440277 ~ 31440996 (+)
LOC110499324 LOC106589740 coding upstream 1467479 30219786 ~ 30241466 (+)
LOC110499323 ppp1r21 coding upstream 1491298 30194269 ~ 30217647 (+)
msh6 msh6 coding upstream 1648758 30025625 ~ 30060187 (+)
erlec1 LOC106589745 coding downstream 4544 31713706 ~ 31725878 (+)
wdr27 wdr27 coding downstream 113598 31822760 ~ 31978074 (+)
thbs2a thbs2 coding downstream 325037 32034199 ~ 32073088 (+)
agpat4 LOC106589751 coding downstream 414824 32123986 ~ 32144750 (+)
kcnk1b kcnk1 coding downstream 536741 32245903 ~ 32262177 (+)
G1685280 NA non-coding upstream 1238 31707504 ~ 31707707 (+)
G1685279 NA non-coding upstream 1974 31706758 ~ 31706971 (+)
G1685277 NA non-coding upstream 4274 31704395 ~ 31704671 (+)
G1685276 NA non-coding upstream 4579 31704035 ~ 31704366 (+)
G1685275 NA non-coding upstream 5150 31703547 ~ 31703795 (+)
G1685282 NA non-coding downstream 168 31709330 ~ 31709561 (+)
G1685291 NA non-coding downstream 25707 31734869 ~ 31738506 (+)
G1685473 NA non-coding downstream 204934 31914096 ~ 31916230 (+)
G1685476 NA non-coding downstream 213104 31922266 ~ 31922621 (+)
LOC110499316 LOC106589729 other upstream 2132387 29572397 ~ 29588171 (+)
lhcgr lhr other upstream 2251024 29437357 ~ 29458499 (+)
G1681792 NA other upstream 2930536 28778006 ~ 28778409 (+)
G1681180 NA other upstream 2982450 28717361 ~ 28726495 (+)
G1680230 NA other upstream 4333126 27375354 ~ 27375819 (+)
G1686317 LOC106589755 other downstream 945192 32654354 ~ 32661648 (+)
LOC118942060 LOC106589768 other downstream 1468131 33177293 ~ 33196167 (+)
G1687675 NA other downstream 2616675 34325837 ~ 34326254 (+)
LOC110499396 LOC106589821 other downstream 3672547 35381609 ~ 35384567 (+)
G1689347 NA other downstream 3972205 35681367 ~ 35682437 (+)

Expression


Co-expression Network