Gene
RNA
| Item | Value |
|---|---|
| gene id | G1685883 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048584.1 |
| NCBI id | CM023238.2 |
| chromosome length | 46616863 |
| location | 31882736 ~ 31883899 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1928320 | True | 709 | lncRNA | 0.37 | 2 | 31882736 | 31883899 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110499326 | LOC106589746 | coding | downstream | 76078 | 31734856 ~ 31806658 (-) |
| LOC110498787 | nrxn1 | coding | downstream | 717465 | 30608566 ~ 31165271 (-) |
| LOC110498786 | LOC106589743 | coding | downstream | 1573472 | 30271979 ~ 30309264 (-) |
| foxn2a | foxn2 | coding | downstream | 1724086 | 30108682 ~ 30158650 (-) |
| fbxo11a | fbxo11 | coding | downstream | 1789022 | 30060126 ~ 30093714 (-) |
| LOC110499330 | LOC106589750 | coding | upstream | 259610 | 32143509 ~ 32226222 (-) |
| LOC110499332 | LOC106588150 | coding | upstream | 271038 | 32154937 ~ 32158796 (-) |
| LOC118942460 | NA | coding | upstream | 618230 | 32502129 ~ 32502308 (-) |
| LOC118942014 | NA | coding | upstream | 771058 | 32654957 ~ 32656185 (-) |
| LOC110499335 | LOC106589755 | coding | upstream | 776322 | 32660221 ~ 32661706 (-) |
| G1685378 | NA | non-coding | downstream | 149870 | 31731642 ~ 31732866 (-) |
| G1685342 | NA | non-coding | downstream | 156898 | 31724819 ~ 31725838 (-) |
| G1685370 | LOC108238713 | non-coding | downstream | 171427 | 31710691 ~ 31711309 (-) |
| G1685366 | NA | non-coding | downstream | 185600 | 31696908 ~ 31697136 (-) |
| G1686013 | NA | non-coding | upstream | 204924 | 32088823 ~ 32089175 (-) |
| G1686015 | LOC106569078 | non-coding | upstream | 207232 | 32091131 ~ 32091380 (-) |
| G1686017 | NA | non-coding | upstream | 208104 | 32092003 ~ 32092291 (-) |
| G1686103 | kcnk1 | non-coding | upstream | 374725 | 32258624 ~ 32272244 (-) |
| G1686128 | NA | non-coding | upstream | 426235 | 32310134 ~ 32314207 (-) |
| G1684920 | NA | other | downstream | 469892 | 31407594 ~ 31412844 (-) |
| G1684661 | NA | other | downstream | 769050 | 31111555 ~ 31113686 (-) |
| LOC110499315 | LOC106589727 | other | downstream | 2336419 | 29541315 ~ 29571033 (-) |
| G1681658 | NA | other | downstream | 3346927 | 28535295 ~ 28535809 (-) |
| G1681623 | NA | other | downstream | 3408711 | 28473285 ~ 28474025 (-) |
| LOC110499342 | LOC106589762 | other | upstream | 927808 | 32810995 ~ 32812999 (-) |
| G1686887 | NA | other | upstream | 1193911 | 33077810 ~ 33078027 (-) |
| LOC110499358 | LOC106589782 | other | upstream | 1649774 | 33530945 ~ 33535225 (-) |
| G1687007 | LOC106589782 | other | upstream | 1659787 | 33531084 ~ 33544238 (-) |
| G1689130 | NA | other | upstream | 3375090 | 35258989 ~ 35259818 (-) |
