G1686103 (kcnk1)


Basic Information

Item Value
gene id G1686103
gene name kcnk1
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 32258624 ~ 32272244 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1928564
AGTCTAAATCTGCATTTATTTCTATGAGAAACTAGACAGAGCACAATAATATACAGTTGTTGTTATTGCACAGATACACAGGCGACTGAAATAGCGCATGCACCACACAATAACACTGACAAGGATTGACAAGGACGTCGACAGTTTTGTGTGCTATAAGACCAATGTGGCAtatatataaatcatttaaaGAATAGACCAATGCATTTCAGACAAAATATTTATAACAGTAAAAATATCACTGCAACTGTCAAGTCCCCTTAGCCAGGGGGAGATTGTCATTCTCCCTTTTGGCCAACTAACAAAAGTACCAACACGATTACATGCAATTCCTCTGTTTGCTAAACTGGTATTCAAAACAAAACATTCTTGACAATGTTAAAGGCTTCTACTCATTCTGTCATTGTGCGATGTAGAAGAGTTTTGTGGAAAGAACTACAGTCAAAACAAAAACCCTGAAACGTTCTTAGATGATCTAGAAAACATAATTCTGCACAACACAACCATATGTTGAAAATGAAACGTCTACATTCTCAAGAATGGACAGCAGTTTCTTGTCTGGTACAATACAATCAGGTAGGATTTGGTGCTATAAAATAAGTCTGTCCCATCTGAAAAAGGTACTCATATAGTATGATTGAGTAGTGTATGATATAGGCTAGTCTGTcctacatatgtaggatcttaatttgatctatattgtcacagcaaaataatcctgcagcaacaggatttgaacgtttagtccataatgttgcttgatcggtggttaggctattagctggctaaaagtaggctacataaaaagtgcaatactgttaatataaccacgtgttagtgtgggttttcagcgaatttatgtaaatcacaaagctcatcttCAAATTCTCTGAAACAAAAGggtaatcaaattaagatcctaaatATGTATAAATAATATTACCAGTATGTACACAAGCAAATCAGCTTGTACTGTAGGCTACAAGCAAATTACTTCCAAATACAGAATGACATCAAGTCAGAAAAAATATGTACAAGCAAATAAATTAATGTTCCTTGATGTACATCTTAACTTAAATGTTAATATAGTACATTTTTTGTAGATCTTTGGACAATATATGTCAGATAACTCATTATGCAGCTATTGAAAATCAGTTTGAGTTTTGACTGCATTGCACTGTAAAGCAGTCCTGTCTGTCaatcagtgtttcctatcttcaagTTTCTCTCACAATGACTCTCATGGAGTACCTTCACTTGAAATCATCATCTGCATAAATCATAAATACACATTTGTAAACACTCCACTTTACATCCTCCAAAAATACTAGACTCTTTTTAAATTTGGTTCAAAAACAGTTCAAATTTCCAGTATCAAATAATGTCTTGTGTCACAAAGCAGTCCTGAAGTTTTATACAAACTGCCAGCCTACTAACATTACTTATGAATTCAGTTGTTAACCCTCTTTGTCCTCtcacttaaagatgcactatgcagaaatcgatCCCCCATTTCTTTGTTGGCAAAATTCAGACAGtacacctaatttcagtttatatggtgacaaaacaagcaagtatagtgaagagaatcattgtaccatctaaaccactgtgaaattaTGTATCATTTCCATAaccaaaatgtttattttcagcTATAAGCAGCTGGTATACAAATCCAAAAGTAAAACTAAActtaacaggaagcatagaaatagcacacatagaacaattcttcttagacttgctttcaattaaAGATCTATAACTTATttatatgtgaatttggtcaggtcgcccaaaacgttccatattgcagctttaaatctGAGGTACGGGAAATTACTTTTGTACTTTCCAGAACCAATTATTTTCATACAAAATATTCAACCCAGTAATTTCCCATTTCCGAGTGGTGTCACATAAGATGAACAGTAACCTGCTGTGTTCAAATATTTTATGAAAATACACTGCAAAAAAATAATGAAGGGTGCTTTGTGGTTCTATACATAATCTTTTTTAGGGACATGATATGAGCAACTGAACCTTTTTTGTTTTAAATAGCAGCATTTCTTCTAGCAGCGTACCCTACTTGGGGTCTGCCTCATTCTTGTTCCCCctttaaagtttaaaaaaagcTTTCATAATTGTCACGAACGTTCAATAAACCATATTACACAGTAAATCCCTTTCTTTTAGACGAATCAACATGAAAAATACACAGTACAGCGCGAGACATGACACATTTAACTACCTTAAAATAACATTGCAAGTTGTACTTTAAACTAGCATCAAACAAGTCTTACTGTAATTAATACACAGAGCATTTACAACAATGAAATGTGCTACTGTTGTATACCTGATACAGTTAACCTGAATACATGCGTTCCATTAAACTCCTGTAAAATAGTACTTAAGGTATACAGACATTACGGCACAATGTGATATTCAGTTACATTTTACAAGGTGGATGTCCCATTTAAGGTTCCCTAATGTGCTATTGTCAAGTCAGTTCTATGAAGCCCATATCTGTGCTTATGTATTACGACTGCCTTATAACTTGCGATGAGCGAGTTCATAATGCATTATAGATACAGTATGTGCTTAATGTTATTCCATCCATGAGAACAGCTGATAGCATGGCTGTTCTGAGCGAGGACTTTGACAATGAACAAAGCTAAAGCAGGCGTTTCCCTTATCATTAAGTTAACCAGCGTACATCAGTTATACATATGAAGGCTATATTAAGTTTTTCCTATGTCAGTGAATACAGATCTTGTTAATGCAGTATAGCACAATAGGCTCATTTTTCATCATTAAGAGAGTGATAGTTAAGTTTCTCATGGATGGTAAAGGGCTAAAAGACAATCGTTCAATTTCAACATTACTAACAATGGTTTGAAGTTGAGCTTTTGTTTTTAAAATGCATCCTTATGCTGAAGCTTAAGTTATAATGTAGTCACAAATATCCTTCTACGAGAGTCCTCTGTATCACCCTCCCATAGGTTGCATCCCAATTCTCTAGCCTTTTCATTAAAAAACATTGAATAGGTGTAAGCATTCACTGGGGAGAGAGTTTCAGCTAACGGTAAAGTTTCTCCTAGAAAATTCATGATAGGCAGTGTACACTTCAAAAGAAGGATAGCAAAATGGGATGCAAACTTGGTTTCACCATCCCCCCTTCAGTACTCTCCTTTTCCTTCTCTAGTTTCCTGCCTATTTCACCGCAACATTTTTAACTATTTCCCCCCCCTCTAGTTGATCATGGGGTCATCTCCACCAGGCGAGGCCAGCACAGGGACACTAACGGAGGGTACGTCCTTAGTCTTGTCCCCCTTGAGCGAGGTGGAGTTGGTCTGGTGGGACACGGAGGTGAAGGACAGATGGTCGTGCTCCAGTATTGCCAGGCGGTCCTGTGGTTTCTCCTTCTTCAGATAGAACATCTTCCTCAGGGTCTTCAGCTGCTGCAGCTCACAGAAGGTCTCCAAGACAACCAGCATCACAACCAGGCCCAGGAGGAGGTA
>TU1928565
ttaaggtatctGTATACAGACATTACGGCACAATGTGATATTCAGTTACATTTTACAAGGTGGATGTCCCATTTAAGGTTCCCTAATGTGCTATTGTCAAGTCAGTTCTATGAAGCCCATATCTGTGCTTATGTATTACGACTGCCTTATAACTTGCGATGAGCGAGTTCATAATGCATTATAGATACAGTATGTGCTTAATGTTATTCCATCCATGAGAACAGCTGATAGCATGGCTGTTCTGAGCGAGGACTTTGACAATGAACAAAGCTAAAGCAGGCGTTTCCCTTATCATTAAGTTAACCAGCGTACATCAGTTATACATATGAAGGCTATATTAAGTTTTTCCTATGTCAGTGAATACAGATCTTGTTAATGCAGTATAGCACAATAGGCTCATTTTTCATCATTAAGAGAGTGATAGTTAAGTTTCTCATGGATGGTAAAGGGCTAAAAGACAATCGTTCAATTTCAACATTACTAACAATGGTTTGAAGTTGAGCTTTTGTTTTTAAAATGCATCCTTATGCTGAAGCTTAAGTTATAATGTAGTCACAAATATCCTTCTACGAGAGTCCTCTGTATCACCCTCCCATAGGTTGCATCCCAATTCTCTAGCCTTTTCATTAAAAAACATTGAATAGGTGTAAGCATTCACTGGGGAGAGAGTTTCAGCTAACGGTAAAGTTTCTCCTAGAAAATTCATGATAGGCAGTGTACACTTCAAAAGAAGGATAGCAAAATGGGATGCAAACTTGGTTTCACCATCCCCCCTTCAGTACTCTCCTTTTCCTTCTCTAGTTTCCTGCCTATTTCACCGCAACATTTTTAACTATTTCCCCCCCCTCTAGTTGATCATGGGGTCATCTCCACCAGGCGAGGCCAGCACAGGGACACTAACGGAGGGTACGTCCTTAGTCTTGTCCCCCTTGAGCGAGGTGGAGTTGGTCTGGTGGGACACGGAGGTGAAGGACAGATGGTCGTGCTCCAGTATTGCCAGGCGGTCCTGTGGTTTCTCCTTCTTCAGATAGAACATCTTCCTCAGGGTCTTCAGCTGCTGCAGCTCACAGAAGGTCTCCAAGACAACCAGCATCACAACCAGGCCCAGGAGGAGGTA

Function

symbol description
kcnk1 Enables identical protein binding activity; potassium ion leak channel activity; and sodium channel activity. Involved in potassium ion transmembrane transport; regulation of resting membrane potential; and sodium ion transmembrane transport. Located in intracellular membrane-bounded organelle. Is integral component of plasma membrane. Part of potassium channel complex.

NR:

description
potassium channel subfamily K member 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1928564 False 3527 lncRNA 0.37 2 32258624 32262170
TU1928565 True 1117 lncRNA 0.42 2 32258624 32272244

Neighbor

gene id symbol gene type direction distance location
LOC110499330 LOC106589750 coding downstream 32402 32143509 ~ 32226222 (-)
LOC110499332 LOC106588150 coding downstream 99828 32154937 ~ 32158796 (-)
LOC110499326 LOC106589746 coding downstream 451966 31734856 ~ 31806658 (-)
LOC110498787 nrxn1 coding downstream 1093353 30608566 ~ 31165271 (-)
LOC110498786 LOC106589743 coding downstream 1949360 30271979 ~ 30309264 (-)
LOC118942460 NA coding upstream 229885 32502129 ~ 32502308 (-)
LOC118942014 NA coding upstream 382713 32654957 ~ 32656185 (-)
LOC110499335 LOC106589755 coding upstream 387977 32660221 ~ 32661706 (-)
LOC110499337 LOC106589758 coding upstream 404126 32676370 ~ 32688426 (-)
LOC110499340 NA coding upstream 430474 32702718 ~ 32704453 (-)
G1686017 NA non-coding downstream 166333 32092003 ~ 32092291 (-)
G1686015 LOC106569078 non-coding downstream 167244 32091131 ~ 32091380 (-)
G1686013 NA non-coding downstream 169449 32088823 ~ 32089175 (-)
G1685883 NA non-coding downstream 374725 31882736 ~ 31883899 (-)
G1686128 NA non-coding upstream 37890 32310134 ~ 32314207 (-)
G1686157 NA non-coding upstream 125875 32398119 ~ 32398482 (-)
G1686170 NA non-coding upstream 154830 32427074 ~ 32466581 (-)
G1686188 NA non-coding upstream 181650 32453894 ~ 32456754 (-)
G1686189 NA non-coding upstream 182141 32454385 ~ 32457132 (-)
G1684920 NA other downstream 845780 31407594 ~ 31412844 (-)
G1684661 NA other downstream 1144938 31111555 ~ 31113686 (-)
LOC110499315 LOC106589727 other downstream 2712307 29541315 ~ 29571033 (-)
G1681658 NA other downstream 3722815 28535295 ~ 28535809 (-)
G1681623 NA other downstream 3784599 28473285 ~ 28474025 (-)
LOC110499342 LOC106589762 other upstream 539463 32810995 ~ 32812999 (-)
G1686887 NA other upstream 805566 33077810 ~ 33078027 (-)
LOC110499358 LOC106589782 other upstream 1261429 33530945 ~ 33535225 (-)
G1687007 LOC106589782 other upstream 1271442 33531084 ~ 33544238 (-)
G1689130 NA other upstream 2986745 35258989 ~ 35259818 (-)

Expression


Co-expression Network