G1686128


Basic Information

Item Value
gene id G1686128
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 32310134 ~ 32314207 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1928594
gtcacactgcatagggaatagggtgtcacactgcatagggaatagggagtcacactgcatagggaatagggtgtcacactgcatagggaatagggtgtcacacggcatagggaatagggggtcaCACTGCATAGggaatagggagtcacactgcataggcaatagggtgtcacacaacatagggaatagggtatcacacagcatagggaatagagtgtccaactgcatagggaatagggtgccccaCTGCATAGGTAATAGGGTGTCACACTGCATAGGGAGTCAcaatgcatagggaatagggtgtcacactgcatagggaatagggtgtcacacagcatagggaatagggtgtcacactgcatagggaatagggtgtcacactgcatagggaatagggtgtcacacagcatagggaatagggtgtcacactgcatagggaatagtgtgtcacacagcatatggaatagggtgtcacactgcatagggaatagggtgtcacacagcatagggaatagggtgtcacacaGCATAGGGAGTCACAatgcatagggaatagggtgtcacactGCATAGGGAGTCACattgcatagggaatagggtgtcacactgcatagggaatagggagtcacaCTGCATAGGGAGTCACACTGCATAGGGAGTCACACTGCATAGGGACTAGGGAGTCACACTGCATAGGGAGTCACACTGCATAGGGTgtcacactgcatagggaatagggagtcacaCTGCATAGGGGGTCACACTGCATAGGGTgtcacactgcatagggaatagggagtcacactgcatagggtgtcacactgcatagggaatagggagtcacactgcatagggtgtcacactgcatagggaatagggagtcacactgcatagggaatagggagtcacactgcatagggtgtcacactgcatagggaatagggagtcacactgcatatggaatagggtgtcatactgcatagggaatagggagtcacaCTGCATGGGGAATAGGGAGTCACACTGc

Function

NR:

description
PREDICTED: uncharacterized protein LOC106583365

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1928594 True 1030 lncRNA 0.50 5 32310134 32314207

Neighbor

gene id symbol gene type direction distance location
LOC110499330 LOC106589750 coding downstream 83912 32143509 ~ 32226222 (-)
LOC110499332 LOC106588150 coding downstream 151338 32154937 ~ 32158796 (-)
LOC110499326 LOC106589746 coding downstream 503476 31734856 ~ 31806658 (-)
LOC110498787 nrxn1 coding downstream 1144863 30608566 ~ 31165271 (-)
LOC110498786 LOC106589743 coding downstream 2000870 30271979 ~ 30309264 (-)
LOC118942460 NA coding upstream 187922 32502129 ~ 32502308 (-)
LOC118942014 NA coding upstream 340750 32654957 ~ 32656185 (-)
LOC110499335 LOC106589755 coding upstream 346014 32660221 ~ 32661706 (-)
LOC110499337 LOC106589758 coding upstream 362163 32676370 ~ 32688426 (-)
LOC110499340 NA coding upstream 388511 32702718 ~ 32704453 (-)
G1686103 kcnk1 non-coding downstream 37890 32258624 ~ 32272244 (-)
G1686017 NA non-coding downstream 217843 32092003 ~ 32092291 (-)
G1686015 LOC106569078 non-coding downstream 218754 32091131 ~ 32091380 (-)
G1686013 NA non-coding downstream 220959 32088823 ~ 32089175 (-)
G1685883 NA non-coding downstream 426235 31882736 ~ 31883899 (-)
G1686157 NA non-coding upstream 83912 32398119 ~ 32398482 (-)
G1686170 NA non-coding upstream 112867 32427074 ~ 32466581 (-)
G1686188 NA non-coding upstream 139687 32453894 ~ 32456754 (-)
G1686189 NA non-coding upstream 140178 32454385 ~ 32457132 (-)
G1686203 NA non-coding upstream 159731 32473938 ~ 32476120 (-)
G1684920 NA other downstream 897290 31407594 ~ 31412844 (-)
G1684661 NA other downstream 1196448 31111555 ~ 31113686 (-)
LOC110499315 LOC106589727 other downstream 2763817 29541315 ~ 29571033 (-)
G1681658 NA other downstream 3774325 28535295 ~ 28535809 (-)
G1681623 NA other downstream 3836109 28473285 ~ 28474025 (-)
LOC110499342 LOC106589762 other upstream 497500 32810995 ~ 32812999 (-)
G1686887 NA other upstream 763603 33077810 ~ 33078027 (-)
LOC110499358 LOC106589782 other upstream 1219466 33530945 ~ 33535225 (-)
G1687007 LOC106589782 other upstream 1229479 33531084 ~ 33544238 (-)
G1689130 NA other upstream 2944782 35258989 ~ 35259818 (-)

Expression


Co-expression Network