Gene
RNA
| Item | Value |
|---|---|
| gene id | G1686170 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048584.1 |
| NCBI id | CM023238.2 |
| chromosome length | 46616863 |
| location | 32427074 ~ 32466581 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1928651 | True | 277 | lncRNA | 0.47 | 2 | 32427074 | 32466581 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110499330 | LOC106589750 | coding | downstream | 200852 | 32143509 ~ 32226222 (-) |
| LOC110499332 | LOC106588150 | coding | downstream | 268278 | 32154937 ~ 32158796 (-) |
| LOC110499326 | LOC106589746 | coding | downstream | 620416 | 31734856 ~ 31806658 (-) |
| LOC110498787 | nrxn1 | coding | downstream | 1261803 | 30608566 ~ 31165271 (-) |
| LOC110498786 | LOC106589743 | coding | downstream | 2117810 | 30271979 ~ 30309264 (-) |
| LOC118942460 | NA | coding | upstream | 35548 | 32502129 ~ 32502308 (-) |
| LOC118942014 | NA | coding | upstream | 188376 | 32654957 ~ 32656185 (-) |
| LOC110499335 | LOC106589755 | coding | upstream | 193640 | 32660221 ~ 32661706 (-) |
| LOC110499337 | LOC106589758 | coding | upstream | 209789 | 32676370 ~ 32688426 (-) |
| LOC110499340 | NA | coding | upstream | 236137 | 32702718 ~ 32704453 (-) |
| G1686157 | NA | non-coding | downstream | 28592 | 32398119 ~ 32398482 (-) |
| G1686128 | NA | non-coding | downstream | 112867 | 32310134 ~ 32314207 (-) |
| G1686103 | kcnk1 | non-coding | downstream | 154830 | 32258624 ~ 32272244 (-) |
| G1686017 | NA | non-coding | downstream | 334783 | 32092003 ~ 32092291 (-) |
| G1686015 | LOC106569078 | non-coding | downstream | 335694 | 32091131 ~ 32091380 (-) |
| G1686203 | NA | non-coding | upstream | 7357 | 32473938 ~ 32476120 (-) |
| G1686204 | NA | non-coding | upstream | 10770 | 32477351 ~ 32477763 (-) |
| G1686205 | NA | non-coding | upstream | 11613 | 32478194 ~ 32478414 (-) |
| G1686211 | NA | non-coding | upstream | 21882 | 32488463 ~ 32488722 (-) |
| G1686212 | NA | non-coding | upstream | 22414 | 32488995 ~ 32489202 (-) |
| G1684920 | NA | other | downstream | 1014230 | 31407594 ~ 31412844 (-) |
| G1684661 | NA | other | downstream | 1313388 | 31111555 ~ 31113686 (-) |
| LOC110499315 | LOC106589727 | other | downstream | 2880757 | 29541315 ~ 29571033 (-) |
| G1681658 | NA | other | downstream | 3891265 | 28535295 ~ 28535809 (-) |
| G1681623 | NA | other | downstream | 3953049 | 28473285 ~ 28474025 (-) |
| LOC110499342 | LOC106589762 | other | upstream | 345126 | 32810995 ~ 32812999 (-) |
| G1686887 | NA | other | upstream | 611229 | 33077810 ~ 33078027 (-) |
| LOC110499358 | LOC106589782 | other | upstream | 1067092 | 33530945 ~ 33535225 (-) |
| G1687007 | LOC106589782 | other | upstream | 1077105 | 33531084 ~ 33544238 (-) |
| G1689130 | NA | other | upstream | 2792408 | 35258989 ~ 35259818 (-) |
