Gene
RNA
| Item | Value |
|---|---|
| gene id | G1686188 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048584.1 |
| NCBI id | CM023238.2 |
| chromosome length | 46616863 |
| location | 32453894 ~ 32456754 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: zinc finger matrin-type protein 4-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1928670 | True | 275 | lncRNA | 0.41 | 2 | 32453894 | 32456754 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110499330 | LOC106589750 | coding | downstream | 227672 | 32143509 ~ 32226222 (-) |
| LOC110499332 | LOC106588150 | coding | downstream | 295098 | 32154937 ~ 32158796 (-) |
| LOC110499326 | LOC106589746 | coding | downstream | 647236 | 31734856 ~ 31806658 (-) |
| LOC110498787 | nrxn1 | coding | downstream | 1288623 | 30608566 ~ 31165271 (-) |
| LOC110498786 | LOC106589743 | coding | downstream | 2144630 | 30271979 ~ 30309264 (-) |
| LOC118942460 | NA | coding | upstream | 45375 | 32502129 ~ 32502308 (-) |
| LOC118942014 | NA | coding | upstream | 198203 | 32654957 ~ 32656185 (-) |
| LOC110499335 | LOC106589755 | coding | upstream | 203467 | 32660221 ~ 32661706 (-) |
| LOC110499337 | LOC106589758 | coding | upstream | 219616 | 32676370 ~ 32688426 (-) |
| LOC110499340 | NA | coding | upstream | 245964 | 32702718 ~ 32704453 (-) |
| G1686157 | NA | non-coding | downstream | 55412 | 32398119 ~ 32398482 (-) |
| G1686128 | NA | non-coding | downstream | 139687 | 32310134 ~ 32314207 (-) |
| G1686103 | kcnk1 | non-coding | downstream | 181650 | 32258624 ~ 32272244 (-) |
| G1686017 | NA | non-coding | downstream | 361603 | 32092003 ~ 32092291 (-) |
| G1686015 | LOC106569078 | non-coding | downstream | 362514 | 32091131 ~ 32091380 (-) |
| G1686203 | NA | non-coding | upstream | 17184 | 32473938 ~ 32476120 (-) |
| G1686204 | NA | non-coding | upstream | 20597 | 32477351 ~ 32477763 (-) |
| G1686205 | NA | non-coding | upstream | 21440 | 32478194 ~ 32478414 (-) |
| G1686211 | NA | non-coding | upstream | 31709 | 32488463 ~ 32488722 (-) |
| G1686212 | NA | non-coding | upstream | 32241 | 32488995 ~ 32489202 (-) |
| G1684920 | NA | other | downstream | 1041050 | 31407594 ~ 31412844 (-) |
| G1684661 | NA | other | downstream | 1340208 | 31111555 ~ 31113686 (-) |
| LOC110499315 | LOC106589727 | other | downstream | 2907577 | 29541315 ~ 29571033 (-) |
| G1681658 | NA | other | downstream | 3918085 | 28535295 ~ 28535809 (-) |
| G1681623 | NA | other | downstream | 3979869 | 28473285 ~ 28474025 (-) |
| LOC110499342 | LOC106589762 | other | upstream | 354953 | 32810995 ~ 32812999 (-) |
| G1686887 | NA | other | upstream | 621056 | 33077810 ~ 33078027 (-) |
| LOC110499358 | LOC106589782 | other | upstream | 1076919 | 33530945 ~ 33535225 (-) |
| G1687007 | LOC106589782 | other | upstream | 1086932 | 33531084 ~ 33544238 (-) |
| G1689130 | NA | other | upstream | 2802235 | 35258989 ~ 35259818 (-) |
