G1685798


Basic Information

Item Value
gene id G1685798
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 32486915 ~ 32487149 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1928231
CAGAAAGCCTCCaattctatgtcaaagataataaaacaaaaaaacactacagtaaatactacagcatattacagtccacaaaaacattacagtaaatactacagtatattacagtccacaaaaacattacagtaaatactacagtatattacagtccacaaaaacattacagtaaatactacagtatattacagtccacaaaaacattacagtaaatactacagtatattacagt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1928231 True 235 lncRNA 0.28 1 32486915 32487149

Neighbor

gene id symbol gene type direction distance location
LOC110499334 LOC106589753 coding upstream 10750 32291265 ~ 32476165 (+)
kcnk1b kcnk1 coding upstream 224738 32245903 ~ 32262177 (+)
agpat4 LOC106589751 coding upstream 343451 32123986 ~ 32144750 (+)
thbs2a thbs2 coding upstream 413827 32034199 ~ 32073088 (+)
wdr27 wdr27 coding upstream 508841 31822760 ~ 31978074 (+)
LOC110499531 NA coding downstream 125809 32612958 ~ 32613933 (+)
LOC110499339 LOC106589759 coding downstream 202938 32690087 ~ 32702525 (+)
LOC110499338 LOC106589757 coding downstream 215642 32702791 ~ 32736730 (+)
LOC110499341 LOC106589760 coding downstream 260442 32747591 ~ 32760047 (+)
LOC110499344 LOC106589763 coding downstream 362548 32849697 ~ 32863389 (+)
G1685794 NA non-coding upstream 3845 32482861 ~ 32483070 (+)
G1685791 NA non-coding upstream 6311 32480270 ~ 32480604 (+)
G1685680 NA non-coding upstream 245709 32238364 ~ 32241206 (+)
G1685630 LOC106611298 non-coding upstream 309693 32176773 ~ 32177222 (+)
G1685799 NA non-coding downstream 247 32487396 ~ 32487632 (+)
G1685805 NA non-coding downstream 11658 32498807 ~ 32499015 (+)
G1685807 NA non-coding downstream 14510 32501659 ~ 32501871 (+)
G1685830 NA non-coding downstream 53033 32540182 ~ 32540614 (+)
G1686256 NA non-coding downstream 70060 32557209 ~ 32557429 (+)
LOC110499316 LOC106589729 other upstream 2910357 29572397 ~ 29588171 (+)
lhcgr lhr other upstream 3028994 29437357 ~ 29458499 (+)
G1681792 NA other upstream 3708506 28778006 ~ 28778409 (+)
G1681180 NA other upstream 3760420 28717361 ~ 28726495 (+)
G1680230 NA other upstream 5111096 27375354 ~ 27375819 (+)
G1686317 LOC106589755 other downstream 167205 32654354 ~ 32661648 (+)
LOC118942060 LOC106589768 other downstream 690144 33177293 ~ 33196167 (+)
G1687675 NA other downstream 1838688 34325837 ~ 34326254 (+)
LOC110499396 LOC106589821 other downstream 2894560 35381609 ~ 35384567 (+)
G1689347 NA other downstream 3194218 35681367 ~ 35682437 (+)

Expression


Co-expression Network