G1685805


Basic Information

Item Value
gene id G1685805
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 32498807 ~ 32499015 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1928238
aatgaactggcccagagagacaggaaacacagataaatacactggggaaaacaaaatgaactggcccagagagacaggaaacacatataaatacactggggaaaacaaaatgaactggcacagagagacaggaaacacagataaatacactggggaaaacaaaatgaactggcacagagagacaggaaacacagataaatacactgggg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1928238 True 209 lncRNA 0.42 1 32498807 32499015

Neighbor

gene id symbol gene type direction distance location
LOC110499334 LOC106589753 coding upstream 22642 32291265 ~ 32476165 (+)
kcnk1b kcnk1 coding upstream 236630 32245903 ~ 32262177 (+)
agpat4 LOC106589751 coding upstream 355343 32123986 ~ 32144750 (+)
thbs2a thbs2 coding upstream 425719 32034199 ~ 32073088 (+)
wdr27 wdr27 coding upstream 520733 31822760 ~ 31978074 (+)
LOC110499531 NA coding downstream 113943 32612958 ~ 32613933 (+)
LOC110499339 LOC106589759 coding downstream 191072 32690087 ~ 32702525 (+)
LOC110499338 LOC106589757 coding downstream 203776 32702791 ~ 32736730 (+)
LOC110499341 LOC106589760 coding downstream 248576 32747591 ~ 32760047 (+)
LOC110499344 LOC106589763 coding downstream 350682 32849697 ~ 32863389 (+)
G1685799 NA non-coding upstream 11175 32487396 ~ 32487632 (+)
G1685798 NA non-coding upstream 11658 32486915 ~ 32487149 (+)
G1685794 NA non-coding upstream 15737 32482861 ~ 32483070 (+)
G1685791 NA non-coding upstream 18203 32480270 ~ 32480604 (+)
G1685680 NA non-coding upstream 257601 32238364 ~ 32241206 (+)
G1685807 NA non-coding downstream 2644 32501659 ~ 32501871 (+)
G1685830 NA non-coding downstream 41167 32540182 ~ 32540614 (+)
G1686256 NA non-coding downstream 58194 32557209 ~ 32557429 (+)
G1686268 NA non-coding downstream 82521 32581536 ~ 32581881 (+)
G1686272 NA non-coding downstream 88092 32587107 ~ 32587532 (+)
LOC110499316 LOC106589729 other upstream 2922249 29572397 ~ 29588171 (+)
lhcgr lhr other upstream 3040886 29437357 ~ 29458499 (+)
G1681792 NA other upstream 3720398 28778006 ~ 28778409 (+)
G1681180 NA other upstream 3772312 28717361 ~ 28726495 (+)
G1680230 NA other upstream 5122988 27375354 ~ 27375819 (+)
G1686317 LOC106589755 other downstream 155339 32654354 ~ 32661648 (+)
LOC118942060 LOC106589768 other downstream 678278 33177293 ~ 33196167 (+)
G1687675 NA other downstream 1826822 34325837 ~ 34326254 (+)
LOC110499396 LOC106589821 other downstream 2882694 35381609 ~ 35384567 (+)
G1689347 NA other downstream 3182352 35681367 ~ 35682437 (+)

Expression


Co-expression Network