Gene
RNA
| Item | Value |
|---|---|
| gene id | G1686219 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048584.1 |
| NCBI id | CM023238.2 |
| chromosome length | 46616863 |
| location | 32507960 ~ 32508216 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| C-type lectin domain family 4 member M-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1928701 | True | 215 | lncRNA | 0.36 | 2 | 32507960 | 32508216 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118942460 | NA | coding | downstream | 5652 | 32502129 ~ 32502308 (-) |
| LOC110499330 | LOC106589750 | coding | downstream | 281738 | 32143509 ~ 32226222 (-) |
| LOC110499332 | LOC106588150 | coding | downstream | 349164 | 32154937 ~ 32158796 (-) |
| LOC110499326 | LOC106589746 | coding | downstream | 701302 | 31734856 ~ 31806658 (-) |
| LOC110498787 | nrxn1 | coding | downstream | 1342689 | 30608566 ~ 31165271 (-) |
| LOC118942014 | NA | coding | upstream | 146741 | 32654957 ~ 32656185 (-) |
| LOC110499335 | LOC106589755 | coding | upstream | 152005 | 32660221 ~ 32661706 (-) |
| LOC110499337 | LOC106589758 | coding | upstream | 168154 | 32676370 ~ 32688426 (-) |
| LOC110499340 | NA | coding | upstream | 194502 | 32702718 ~ 32704453 (-) |
| LOC110499342 | LOC106589762 | coding | upstream | 302779 | 32810995 ~ 32812999 (-) |
| G1686215 | NA | non-coding | downstream | 11449 | 32495709 ~ 32496511 (-) |
| G1686214 | NA | non-coding | downstream | 13333 | 32494328 ~ 32494627 (-) |
| G1686213 | NA | non-coding | downstream | 14317 | 32493337 ~ 32493643 (-) |
| G1686212 | NA | non-coding | downstream | 18758 | 32488995 ~ 32489202 (-) |
| G1686211 | NA | non-coding | downstream | 19238 | 32488463 ~ 32488722 (-) |
| G1686224 | NA | non-coding | upstream | 7715 | 32515931 ~ 32516166 (-) |
| G1686241 | NA | non-coding | upstream | 40026 | 32548242 ~ 32548448 (-) |
| G1686284 | NA | non-coding | upstream | 95354 | 32603570 ~ 32603836 (-) |
| G1686405 | NA | non-coding | upstream | 99450 | 32607666 ~ 32608096 (-) |
| G1686412 | NA | non-coding | upstream | 119319 | 32627535 ~ 32627762 (-) |
| G1684920 | NA | other | downstream | 1095116 | 31407594 ~ 31412844 (-) |
| G1684661 | NA | other | downstream | 1394274 | 31111555 ~ 31113686 (-) |
| LOC110499315 | LOC106589727 | other | downstream | 2961643 | 29541315 ~ 29571033 (-) |
| G1681658 | NA | other | downstream | 3972151 | 28535295 ~ 28535809 (-) |
| G1681623 | NA | other | downstream | 4033935 | 28473285 ~ 28474025 (-) |
| G1686887 | NA | other | upstream | 569594 | 33077810 ~ 33078027 (-) |
| LOC110499358 | LOC106589782 | other | upstream | 1025457 | 33530945 ~ 33535225 (-) |
| G1687007 | LOC106589782 | other | upstream | 1035470 | 33531084 ~ 33544238 (-) |
| G1689130 | NA | other | upstream | 2750773 | 35258989 ~ 35259818 (-) |
