G1686268


Basic Information

Item Value
gene id G1686268
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 32581536 ~ 32581881 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1928752
atgttaatgcgagtgtagcgaaatgcttgtgcttctagttccgacaatgcagtaataaccaatgagtattctaacctaacaattccacaactactaccttatagacacaagtgtaaggggataaagaatatgtacataaagatatatgaatgagtgatggtacagaacggcataggcaagacgcagtagatggtatcgagtacagtatatacatatgagatgagtaatgtagggtatgtaaacaaagtggcatagtttaaagtggctagtgatacatgtattacataaagatgcagtagatgatatagagtacagtatatacatatatgagatgagtaatgtaggg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1928752 True 346 lncRNA 0.36 1 32581536 32581881

Neighbor

gene id symbol gene type direction distance location
LOC110499334 LOC106589753 coding upstream 105371 32291265 ~ 32476165 (+)
kcnk1b kcnk1 coding upstream 319359 32245903 ~ 32262177 (+)
agpat4 LOC106589751 coding upstream 438072 32123986 ~ 32144750 (+)
thbs2a thbs2 coding upstream 508448 32034199 ~ 32073088 (+)
wdr27 wdr27 coding upstream 603462 31822760 ~ 31978074 (+)
LOC110499531 NA coding downstream 31077 32612958 ~ 32613933 (+)
LOC110499339 LOC106589759 coding downstream 108206 32690087 ~ 32702525 (+)
LOC110499338 LOC106589757 coding downstream 120910 32702791 ~ 32736730 (+)
LOC110499341 LOC106589760 coding downstream 165710 32747591 ~ 32760047 (+)
LOC110499344 LOC106589763 coding downstream 267816 32849697 ~ 32863389 (+)
G1686256 NA non-coding upstream 24107 32557209 ~ 32557429 (+)
G1685830 NA non-coding upstream 40922 32540182 ~ 32540614 (+)
G1685807 NA non-coding upstream 79665 32501659 ~ 32501871 (+)
G1685805 NA non-coding upstream 82521 32498807 ~ 32499015 (+)
G1685799 NA non-coding upstream 93904 32487396 ~ 32487632 (+)
G1686272 NA non-coding downstream 5226 32587107 ~ 32587532 (+)
G1686274 NA non-coding downstream 9028 32590909 ~ 32591522 (+)
G1686292 NA non-coding downstream 39396 32621277 ~ 32621527 (+)
G1686294 NA non-coding downstream 42381 32624262 ~ 32624464 (+)
G1686296 NA non-coding downstream 44651 32626532 ~ 32626835 (+)
LOC110499316 LOC106589729 other upstream 3004978 29572397 ~ 29588171 (+)
lhcgr lhr other upstream 3123615 29437357 ~ 29458499 (+)
G1681792 NA other upstream 3803127 28778006 ~ 28778409 (+)
G1681180 NA other upstream 3855041 28717361 ~ 28726495 (+)
G1680230 NA other upstream 5205717 27375354 ~ 27375819 (+)
G1686317 LOC106589755 other downstream 72473 32654354 ~ 32661648 (+)
LOC118942060 LOC106589768 other downstream 595412 33177293 ~ 33196167 (+)
G1687675 NA other downstream 1743956 34325837 ~ 34326254 (+)
LOC110499396 LOC106589821 other downstream 2799828 35381609 ~ 35384567 (+)
G1689347 NA other downstream 3099486 35681367 ~ 35682437 (+)

Expression


Co-expression Network