G1686294


Basic Information

Item Value
gene id G1686294
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 32624262 ~ 32624464 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1928781
ATACAAATGACTTTGTACACTTGAGAACTTATTTTCTATGTGTGAGTGCTTCCAAATATGGAGTTGCAGGTTTGCCaaatctgtcacgttctgaccatagttcttttgtgttttctttgttttagtgttggtcaggacgtgagctgagtgggcattctatgttgtatgtctagtttgtctatttctatgtttggcctgatgtg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1928781 True 203 lncRNA 0.38 1 32624262 32624464

Neighbor

gene id symbol gene type direction distance location
LOC110499531 NA coding upstream 10329 32612958 ~ 32613933 (+)
LOC110499334 LOC106589753 coding upstream 148097 32291265 ~ 32476165 (+)
kcnk1b kcnk1 coding upstream 362085 32245903 ~ 32262177 (+)
agpat4 LOC106589751 coding upstream 480798 32123986 ~ 32144750 (+)
thbs2a thbs2 coding upstream 551174 32034199 ~ 32073088 (+)
LOC110499339 LOC106589759 coding downstream 65623 32690087 ~ 32702525 (+)
LOC110499338 LOC106589757 coding downstream 78327 32702791 ~ 32736730 (+)
LOC110499341 LOC106589760 coding downstream 123127 32747591 ~ 32760047 (+)
LOC110499344 LOC106589763 coding downstream 225233 32849697 ~ 32863389 (+)
LOC110499532 hpse2 coding downstream 438571 33063035 ~ 33132825 (+)
G1686292 NA non-coding upstream 2735 32621277 ~ 32621527 (+)
G1686274 NA non-coding upstream 32740 32590909 ~ 32591522 (+)
G1686272 NA non-coding upstream 36730 32587107 ~ 32587532 (+)
G1686268 NA non-coding upstream 42381 32581536 ~ 32581881 (+)
G1686256 NA non-coding upstream 66833 32557209 ~ 32557429 (+)
G1686296 NA non-coding downstream 2068 32626532 ~ 32626835 (+)
G1686302 NA non-coding downstream 17024 32641488 ~ 32641702 (+)
G1686303 NA non-coding downstream 17585 32642049 ~ 32642286 (+)
G1686333 NA non-coding downstream 51931 32676395 ~ 32678456 (+)
G1686310 NA non-coding downstream 82363 32706827 ~ 32707141 (+)
LOC110499316 LOC106589729 other upstream 3047704 29572397 ~ 29588171 (+)
lhcgr lhr other upstream 3166341 29437357 ~ 29458499 (+)
G1681792 NA other upstream 3845853 28778006 ~ 28778409 (+)
G1681180 NA other upstream 3897767 28717361 ~ 28726495 (+)
G1680230 NA other upstream 5248443 27375354 ~ 27375819 (+)
G1686317 LOC106589755 other downstream 29890 32654354 ~ 32661648 (+)
LOC118942060 LOC106589768 other downstream 552829 33177293 ~ 33196167 (+)
G1687675 NA other downstream 1701373 34325837 ~ 34326254 (+)
LOC110499396 LOC106589821 other downstream 2757245 35381609 ~ 35384567 (+)
G1689347 NA other downstream 3056903 35681367 ~ 35682437 (+)

Expression


Co-expression Network