Gene
RNA
| Item | Value |
|---|---|
| gene id | G1686463 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048584.1 |
| NCBI id | CM023238.2 |
| chromosome length | 46616863 |
| location | 32715065 ~ 32715782 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| putative RNA-directed DNA polymerase from transposon X-element |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1928964 | True | 718 | lncRNA | 0.41 | 1 | 32715065 | 32715782 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110499340 | NA | coding | downstream | 10612 | 32702718 ~ 32704453 (-) |
| LOC110499337 | LOC106589758 | coding | downstream | 26639 | 32676370 ~ 32688426 (-) |
| LOC110499335 | LOC106589755 | coding | downstream | 53359 | 32660221 ~ 32661706 (-) |
| LOC118942014 | NA | coding | downstream | 58880 | 32654957 ~ 32656185 (-) |
| LOC118942460 | NA | coding | downstream | 212757 | 32502129 ~ 32502308 (-) |
| LOC110499342 | LOC106589762 | coding | upstream | 95213 | 32810995 ~ 32812999 (-) |
| LOC110499343 | LOC106589761 | coding | upstream | 100605 | 32816387 ~ 32821014 (-) |
| LOC110499345 | LOC106589764 | coding | upstream | 154733 | 32870515 ~ 32902674 (-) |
| LOC118942059 | NA | coding | upstream | 213223 | 32929005 ~ 32940772 (-) |
| st3gal7 | LOC106589773 | coding | upstream | 447913 | 33163695 ~ 33175005 (-) |
| G1686462 | NA | non-coding | downstream | 233 | 32714631 ~ 32714832 (-) |
| G1686461 | NA | non-coding | downstream | 851 | 32713735 ~ 32714214 (-) |
| G1686457 | NA | non-coding | downstream | 5138 | 32709635 ~ 32709927 (-) |
| G1686456 | NA | non-coding | downstream | 6525 | 32708217 ~ 32708540 (-) |
| G1686455 | NA | non-coding | downstream | 6928 | 32707923 ~ 32708137 (-) |
| G1686482 | NA | non-coding | upstream | 29081 | 32744863 ~ 32745190 (-) |
| G1686483 | NA | non-coding | upstream | 30472 | 32746254 ~ 32746480 (-) |
| G1686486 | LOC106589760 | non-coding | upstream | 41538 | 32757320 ~ 32760047 (-) |
| G1686488 | NA | non-coding | upstream | 47045 | 32762827 ~ 32763176 (-) |
| G1686489 | NA | non-coding | upstream | 56562 | 32772344 ~ 32772549 (-) |
| G1684920 | NA | other | downstream | 1302221 | 31407594 ~ 31412844 (-) |
| G1684661 | NA | other | downstream | 1601379 | 31111555 ~ 31113686 (-) |
| LOC110499315 | LOC106589727 | other | downstream | 3168748 | 29541315 ~ 29571033 (-) |
| G1681658 | NA | other | downstream | 4179256 | 28535295 ~ 28535809 (-) |
| G1681623 | NA | other | downstream | 4241040 | 28473285 ~ 28474025 (-) |
| G1686887 | NA | other | upstream | 362028 | 33077810 ~ 33078027 (-) |
| LOC110499358 | LOC106589782 | other | upstream | 817891 | 33530945 ~ 33535225 (-) |
| G1687007 | LOC106589782 | other | upstream | 827904 | 33531084 ~ 33544238 (-) |
| G1689130 | NA | other | upstream | 2543207 | 35258989 ~ 35259818 (-) |
