G1686366


Basic Information

Item Value
gene id G1686366
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 32776420 ~ 32776670 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1928860
ctaggcaagtcagttaagactcttatttacaatgacagcctaccttagccaaacctggacaacgctggacCAACTGTGATCAGgcaggacgcggctggggatgccttctgggcctgcagccttgcgagggttaacacgtttaaatgttttactcacgtcggctgcagtgaaggagagtccacaggttttggtagcgggccgtgtcagtggcactgtattgtcctcaaagcgtgcaaagaagttgtttagtc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1928860 True 251 lncRNA 0.51 1 32776420 32776670

Neighbor

gene id symbol gene type direction distance location
LOC110499341 LOC106589760 coding upstream 16373 32747591 ~ 32760047 (+)
LOC110499338 LOC106589757 coding upstream 39690 32702791 ~ 32736730 (+)
LOC110499339 LOC106589759 coding upstream 73895 32690087 ~ 32702525 (+)
LOC110499531 NA coding upstream 162487 32612958 ~ 32613933 (+)
LOC110499334 LOC106589753 coding upstream 300255 32291265 ~ 32476165 (+)
LOC110499344 LOC106589763 coding downstream 73027 32849697 ~ 32863389 (+)
LOC110499532 hpse2 coding downstream 286365 33063035 ~ 33132825 (+)
LOC118942060 LOC106589768 coding downstream 408394 33177293 ~ 33196167 (+)
LOC110499352 LOC106589767 coding downstream 439602 33216272 ~ 33262134 (+)
LOC110499354 NA coding downstream 698270 33474940 ~ 33517443 (+)
G1686364 NA non-coding upstream 831 32775380 ~ 32775589 (+)
G1686362 NA non-coding upstream 3807 32772228 ~ 32772613 (+)
G1686352 NA non-coding upstream 31201 32744868 ~ 32745219 (+)
G1686310 NA non-coding upstream 69279 32706827 ~ 32707141 (+)
G1686333 NA non-coding upstream 97964 32676395 ~ 32678456 (+)
G1686367 NA non-coding downstream 405 32777075 ~ 32777281 (+)
G1686371 NA non-coding downstream 10867 32787537 ~ 32787772 (+)
G1686380 NA non-coding downstream 23282 32799952 ~ 32800295 (+)
G1686384 NA non-coding downstream 28662 32805332 ~ 32805587 (+)
G1686391 NA non-coding downstream 44362 32821032 ~ 32821305 (+)
G1686317 LOC106589755 other upstream 114772 32654354 ~ 32661648 (+)
LOC110499316 LOC106589729 other upstream 3199862 29572397 ~ 29588171 (+)
lhcgr lhr other upstream 3318499 29437357 ~ 29458499 (+)
G1681792 NA other upstream 3998011 28778006 ~ 28778409 (+)
G1681180 NA other upstream 4049925 28717361 ~ 28726495 (+)
G1687675 NA other downstream 1549167 34325837 ~ 34326254 (+)
LOC110499396 LOC106589821 other downstream 2605039 35381609 ~ 35384567 (+)
G1689347 NA other downstream 2904697 35681367 ~ 35682437 (+)
LOC118942012 LOC106589797 other downstream 2924550 35701200 ~ 35702156 (+)

Expression


Co-expression Network