Gene
RNA
| Item | Value |
|---|---|
| gene id | G1686371 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048584.1 |
| NCBI id | CM023238.2 |
| chromosome length | 46616863 |
| location | 32787537 ~ 32787772 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1928865 | True | 236 | lncRNA | 0.51 | 1 | 32787537 | 32787772 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110499341 | LOC106589760 | coding | upstream | 27490 | 32747591 ~ 32760047 (+) |
| LOC110499338 | LOC106589757 | coding | upstream | 50807 | 32702791 ~ 32736730 (+) |
| LOC110499339 | LOC106589759 | coding | upstream | 85012 | 32690087 ~ 32702525 (+) |
| LOC110499531 | NA | coding | upstream | 173604 | 32612958 ~ 32613933 (+) |
| LOC110499334 | LOC106589753 | coding | upstream | 311372 | 32291265 ~ 32476165 (+) |
| LOC110499344 | LOC106589763 | coding | downstream | 61925 | 32849697 ~ 32863389 (+) |
| LOC110499532 | hpse2 | coding | downstream | 275263 | 33063035 ~ 33132825 (+) |
| LOC118942060 | LOC106589768 | coding | downstream | 397292 | 33177293 ~ 33196167 (+) |
| LOC110499352 | LOC106589767 | coding | downstream | 428500 | 33216272 ~ 33262134 (+) |
| LOC110499354 | NA | coding | downstream | 687168 | 33474940 ~ 33517443 (+) |
| G1686367 | NA | non-coding | upstream | 10256 | 32777075 ~ 32777281 (+) |
| G1686366 | NA | non-coding | upstream | 10867 | 32776420 ~ 32776670 (+) |
| G1686364 | NA | non-coding | upstream | 11948 | 32775380 ~ 32775589 (+) |
| G1686362 | NA | non-coding | upstream | 14924 | 32772228 ~ 32772613 (+) |
| G1686352 | NA | non-coding | upstream | 42318 | 32744868 ~ 32745219 (+) |
| G1686380 | NA | non-coding | downstream | 12180 | 32799952 ~ 32800295 (+) |
| G1686384 | NA | non-coding | downstream | 17560 | 32805332 ~ 32805587 (+) |
| G1686391 | NA | non-coding | downstream | 33260 | 32821032 ~ 32821305 (+) |
| G1686395 | NA | non-coding | downstream | 40373 | 32828145 ~ 32828568 (+) |
| G1686402 | NA | non-coding | downstream | 50802 | 32838574 ~ 32839040 (+) |
| G1686317 | LOC106589755 | other | upstream | 125889 | 32654354 ~ 32661648 (+) |
| LOC110499316 | LOC106589729 | other | upstream | 3210979 | 29572397 ~ 29588171 (+) |
| lhcgr | lhr | other | upstream | 3329616 | 29437357 ~ 29458499 (+) |
| G1681792 | NA | other | upstream | 4009128 | 28778006 ~ 28778409 (+) |
| G1681180 | NA | other | upstream | 4061042 | 28717361 ~ 28726495 (+) |
| G1687675 | NA | other | downstream | 1538065 | 34325837 ~ 34326254 (+) |
| LOC110499396 | LOC106589821 | other | downstream | 2593937 | 35381609 ~ 35384567 (+) |
| G1689347 | NA | other | downstream | 2893595 | 35681367 ~ 35682437 (+) |
| LOC118942012 | LOC106589797 | other | downstream | 2913448 | 35701200 ~ 35702156 (+) |
