G1686380


Basic Information

Item Value
gene id G1686380
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 32799952 ~ 32800295 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1928874
ATggattagaaacattgtttgacatgtttctacgaactttaatggaacttttttgacttttcgtctggactttgTGAGTGCGCtttgtgcatttggattactggactaaacATGCGAACAAAAAGGaaaaggtatttggacataaagatgaactttatcgaacaaaacaaacatttattgtttaacatggagacctgggagtgccatcagatgaagatcatcaaaggtaagtgattcattttaacgctatttctgacttttgtgacacctctccttggttggaaaatggctgtatggttttctgtggctaggcgcggacctaacataatgatatgttctgcttt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1928874 True 344 lncRNA 0.37 1 32799952 32800295

Neighbor

gene id symbol gene type direction distance location
LOC110499341 LOC106589760 coding upstream 39905 32747591 ~ 32760047 (+)
LOC110499338 LOC106589757 coding upstream 63222 32702791 ~ 32736730 (+)
LOC110499339 LOC106589759 coding upstream 97427 32690087 ~ 32702525 (+)
LOC110499531 NA coding upstream 186019 32612958 ~ 32613933 (+)
LOC110499334 LOC106589753 coding upstream 323787 32291265 ~ 32476165 (+)
LOC110499344 LOC106589763 coding downstream 49402 32849697 ~ 32863389 (+)
LOC110499532 hpse2 coding downstream 262740 33063035 ~ 33132825 (+)
LOC118942060 LOC106589768 coding downstream 384769 33177293 ~ 33196167 (+)
LOC110499352 LOC106589767 coding downstream 415977 33216272 ~ 33262134 (+)
LOC110499354 NA coding downstream 674645 33474940 ~ 33517443 (+)
G1686371 NA non-coding upstream 12180 32787537 ~ 32787772 (+)
G1686367 NA non-coding upstream 22671 32777075 ~ 32777281 (+)
G1686366 NA non-coding upstream 23282 32776420 ~ 32776670 (+)
G1686364 NA non-coding upstream 24363 32775380 ~ 32775589 (+)
G1686362 NA non-coding upstream 27339 32772228 ~ 32772613 (+)
G1686384 NA non-coding downstream 5037 32805332 ~ 32805587 (+)
G1686391 NA non-coding downstream 20737 32821032 ~ 32821305 (+)
G1686395 NA non-coding downstream 27850 32828145 ~ 32828568 (+)
G1686402 NA non-coding downstream 38279 32838574 ~ 32839040 (+)
G1686386 NA non-coding downstream 40005 32840300 ~ 32840938 (+)
G1686317 LOC106589755 other upstream 138304 32654354 ~ 32661648 (+)
LOC110499316 LOC106589729 other upstream 3223394 29572397 ~ 29588171 (+)
lhcgr lhr other upstream 3342031 29437357 ~ 29458499 (+)
G1681792 NA other upstream 4021543 28778006 ~ 28778409 (+)
G1681180 NA other upstream 4073457 28717361 ~ 28726495 (+)
G1687675 NA other downstream 1525542 34325837 ~ 34326254 (+)
LOC110499396 LOC106589821 other downstream 2581414 35381609 ~ 35384567 (+)
G1689347 NA other downstream 2881072 35681367 ~ 35682437 (+)
LOC118942012 LOC106589797 other downstream 2900925 35701200 ~ 35702156 (+)

Expression


Co-expression Network