Gene
RNA
| Item | Value |
|---|---|
| gene id | G1686391 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048584.1 |
| NCBI id | CM023238.2 |
| chromosome length | 46616863 |
| location | 32821032 ~ 32821305 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1928887 | True | 274 | lncRNA | 0.39 | 1 | 32821032 | 32821305 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110499341 | LOC106589760 | coding | upstream | 60985 | 32747591 ~ 32760047 (+) |
| LOC110499338 | LOC106589757 | coding | upstream | 84302 | 32702791 ~ 32736730 (+) |
| LOC110499339 | LOC106589759 | coding | upstream | 118507 | 32690087 ~ 32702525 (+) |
| LOC110499531 | NA | coding | upstream | 207099 | 32612958 ~ 32613933 (+) |
| LOC110499334 | LOC106589753 | coding | upstream | 344867 | 32291265 ~ 32476165 (+) |
| LOC110499344 | LOC106589763 | coding | downstream | 28392 | 32849697 ~ 32863389 (+) |
| LOC110499532 | hpse2 | coding | downstream | 241730 | 33063035 ~ 33132825 (+) |
| LOC118942060 | LOC106589768 | coding | downstream | 363759 | 33177293 ~ 33196167 (+) |
| LOC110499352 | LOC106589767 | coding | downstream | 394967 | 33216272 ~ 33262134 (+) |
| LOC110499354 | NA | coding | downstream | 653635 | 33474940 ~ 33517443 (+) |
| G1686384 | NA | non-coding | upstream | 15445 | 32805332 ~ 32805587 (+) |
| G1686380 | NA | non-coding | upstream | 20737 | 32799952 ~ 32800295 (+) |
| G1686371 | NA | non-coding | upstream | 33260 | 32787537 ~ 32787772 (+) |
| G1686367 | NA | non-coding | upstream | 43751 | 32777075 ~ 32777281 (+) |
| G1686366 | NA | non-coding | upstream | 44362 | 32776420 ~ 32776670 (+) |
| G1686395 | NA | non-coding | downstream | 6840 | 32828145 ~ 32828568 (+) |
| G1686402 | NA | non-coding | downstream | 17269 | 32838574 ~ 32839040 (+) |
| G1686386 | NA | non-coding | downstream | 18995 | 32840300 ~ 32840938 (+) |
| G1686518 | NA | non-coding | downstream | 25722 | 32847027 ~ 32847375 (+) |
| G1686524 | NA | non-coding | downstream | 43587 | 32864892 ~ 32868963 (+) |
| G1686317 | LOC106589755 | other | upstream | 159384 | 32654354 ~ 32661648 (+) |
| LOC110499316 | LOC106589729 | other | upstream | 3244474 | 29572397 ~ 29588171 (+) |
| lhcgr | lhr | other | upstream | 3363111 | 29437357 ~ 29458499 (+) |
| G1681792 | NA | other | upstream | 4042623 | 28778006 ~ 28778409 (+) |
| G1681180 | NA | other | upstream | 4094537 | 28717361 ~ 28726495 (+) |
| G1687675 | NA | other | downstream | 1504532 | 34325837 ~ 34326254 (+) |
| LOC110499396 | LOC106589821 | other | downstream | 2560404 | 35381609 ~ 35384567 (+) |
| G1689347 | NA | other | downstream | 2860062 | 35681367 ~ 35682437 (+) |
| LOC118942012 | LOC106589797 | other | downstream | 2879915 | 35701200 ~ 35702156 (+) |
