G1686402


Basic Information

Item Value
gene id G1686402
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 32838574 ~ 32839040 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1928898
ctgacaacctgatccaggttgcaggcactggttacagtttgttacaagttttttcctgagtgggcagcttgatgatagccaatcaatatttaaatcacccagaaaatatacttctctgttgatatcacatacattatcaagcatttcacacatattatccagatactgaatgttagcacttggtggtctatagcagattcccaccagaatgggctttaggtgaggcagattaacctgtagccatattacttcaacagtatttaacattagatcgtctctaagctttacaggaatgtggttctgaatatagacgcAACACCGCctccgttggcatttctgtctttttggTAGAtattatatccttgtattgctaccactgtatcatcaaaggatttatctaagtgagtttcagagatagtcagaatatgaatgtcatctgttacaagcaagttattgacttcatggac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1928898 True 467 lncRNA 0.38 1 32838574 32839040

Neighbor

gene id symbol gene type direction distance location
LOC110499341 LOC106589760 coding upstream 78527 32747591 ~ 32760047 (+)
LOC110499338 LOC106589757 coding upstream 101844 32702791 ~ 32736730 (+)
LOC110499339 LOC106589759 coding upstream 136049 32690087 ~ 32702525 (+)
LOC110499531 NA coding upstream 224641 32612958 ~ 32613933 (+)
LOC110499334 LOC106589753 coding upstream 362409 32291265 ~ 32476165 (+)
LOC110499344 LOC106589763 coding downstream 10657 32849697 ~ 32863389 (+)
LOC110499532 hpse2 coding downstream 223995 33063035 ~ 33132825 (+)
LOC118942060 LOC106589768 coding downstream 346024 33177293 ~ 33196167 (+)
LOC110499352 LOC106589767 coding downstream 377232 33216272 ~ 33262134 (+)
LOC110499354 NA coding downstream 635900 33474940 ~ 33517443 (+)
G1686395 NA non-coding upstream 10006 32828145 ~ 32828568 (+)
G1686391 NA non-coding upstream 17269 32821032 ~ 32821305 (+)
G1686384 NA non-coding upstream 32987 32805332 ~ 32805587 (+)
G1686380 NA non-coding upstream 38279 32799952 ~ 32800295 (+)
G1686371 NA non-coding upstream 50802 32787537 ~ 32787772 (+)
G1686386 NA non-coding downstream 1260 32840300 ~ 32840938 (+)
G1686518 NA non-coding downstream 7987 32847027 ~ 32847375 (+)
G1686524 NA non-coding downstream 25852 32864892 ~ 32868963 (+)
G1686563 NA non-coding downstream 115249 32954289 ~ 33058087 (+)
G1686566 NA non-coding downstream 121819 32960859 ~ 32965536 (+)
G1686317 LOC106589755 other upstream 176926 32654354 ~ 32661648 (+)
LOC110499316 LOC106589729 other upstream 3262016 29572397 ~ 29588171 (+)
lhcgr lhr other upstream 3380653 29437357 ~ 29458499 (+)
G1681792 NA other upstream 4060165 28778006 ~ 28778409 (+)
G1681180 NA other upstream 4112079 28717361 ~ 28726495 (+)
G1687675 NA other downstream 1486797 34325837 ~ 34326254 (+)
LOC110499396 LOC106589821 other downstream 2542669 35381609 ~ 35384567 (+)
G1689347 NA other downstream 2842327 35681367 ~ 35682437 (+)
LOC118942012 LOC106589797 other downstream 2862180 35701200 ~ 35702156 (+)

Expression


Co-expression Network