G1686567


Basic Information

Item Value
gene id G1686567
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 32982067 ~ 32993118 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1929110
agagagagagagacattaacctgctgtagtagaaagagagagacattaacctgctgtagtagaagagagagacattaacctgctgtagtagaagagagagacattaacctgctgtagtagagagagagacattaacatgctgtagtagagagagacattaacctgctgtagtagagagagagacattaatctgctgtagaagagagagagacattaacctgctgtagtagagagagagagacattaacctgctgtagaagagagagagagattaacctgctgtagtagagagagagacattaacctgctgtagaagagagagagacattaacctgctgtagtagagagagagagacattaacctgctgtagaagagagagagagattaatctgctgtagaagagagagagacattaacctgctgtagtagagagagagagacattaacctgctatagtagagagagagagactttaacctgctgtagtagagagagagagacattaacctgctgtagaagagagagagagacattaacctgctatagtagagagagagagacattaacctgctgtagaagagagagagagacattaacctgctgtagtagagagagagagagacattaacctgctgtagtagagagagagagacattaacctgctgtagtagagagagagagacattaacctgctgtagtagagagagagagacattaacctgctgtagaagagagagagacattaacctgctatagtagagagagagagagacattaacctgctatagtagagagagagagagattaacctgctgtaatagagagagagacattaacctgctgtagtagagagagagagacattaacctgctgtagaagagagagagacattaacctgctgtaatagagagagacattaacctgctatattagagagagagagagagagacattaacctgctggagtagagagagagagagacattaacctgctggagtagagagagagagagagagagagacattacactgctgtaatagagggagagagacactaacctgctgtaggagagagagagagagacattaacctgttatagtagagagagagagagagagagagagagagagagagacattaacctgctgtagtagagagagagacattaacctgctatattagagagagagagagagagagagagacattaacctgctggagtagagagagagatagacattaacctgctggagtagagagagtgagatttTAACCtgctggagtagagagagagacattaacatgctgtagtatagagagagacattaacctgctgtagaagagagagagacattaacctgctgtagtagagagcgagacattaacctgctgtagtagagagagagagacattaacctgctgtagtagagagagagagacattaacctgctgtagtagagagagagacattaacctgctgtagtagagaga

Function

NR:

description
E3 ubiquitin-protein ligase RBBP6-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1929110 True 1493 lncRNA 0.43 2 32982067 32993118

Neighbor

gene id symbol gene type direction distance location
LOC110499344 LOC106589763 coding upstream 118678 32849697 ~ 32863389 (+)
LOC110499341 LOC106589760 coding upstream 222020 32747591 ~ 32760047 (+)
LOC110499338 LOC106589757 coding upstream 245337 32702791 ~ 32736730 (+)
LOC110499339 LOC106589759 coding upstream 279542 32690087 ~ 32702525 (+)
LOC110499531 NA coding upstream 368134 32612958 ~ 32613933 (+)
LOC110499532 hpse2 coding downstream 69917 33063035 ~ 33132825 (+)
LOC118942060 LOC106589768 coding downstream 191946 33177293 ~ 33196167 (+)
LOC110499352 LOC106589767 coding downstream 223154 33216272 ~ 33262134 (+)
LOC110499354 NA coding downstream 481822 33474940 ~ 33517443 (+)
LOC118942063 NA coding downstream 535680 33528620 ~ 33530380 (+)
G1686566 NA non-coding upstream 16531 32960859 ~ 32965536 (+)
G1686571 NA non-coding upstream 19121 32961782 ~ 32962946 (+)
G1686524 NA non-coding upstream 113104 32864892 ~ 32868963 (+)
G1686518 NA non-coding upstream 134692 32847027 ~ 32847375 (+)
G1686386 NA non-coding upstream 141129 32840300 ~ 32840938 (+)
G1686579 NA non-coding downstream 16291 33009409 ~ 33016212 (+)
G1686593 NA non-coding downstream 80209 33073327 ~ 33073570 (+)
G1686594 NA non-coding downstream 81290 33074408 ~ 33074618 (+)
G1686597 NA non-coding downstream 84415 33077533 ~ 33077836 (+)
G1686607 NA non-coding downstream 106394 33099512 ~ 33099734 (+)
G1686317 LOC106589755 other upstream 320419 32654354 ~ 32661648 (+)
LOC110499316 LOC106589729 other upstream 3405509 29572397 ~ 29588171 (+)
lhcgr lhr other upstream 3524146 29437357 ~ 29458499 (+)
G1681792 NA other upstream 4203658 28778006 ~ 28778409 (+)
G1681180 NA other upstream 4255572 28717361 ~ 28726495 (+)
G1687675 NA other downstream 1332719 34325837 ~ 34326254 (+)
LOC110499396 LOC106589821 other downstream 2388591 35381609 ~ 35384567 (+)
G1689347 NA other downstream 2688249 35681367 ~ 35682437 (+)
LOC118942012 LOC106589797 other downstream 2708102 35701200 ~ 35702156 (+)

Expression


Co-expression Network