G1686593


Basic Information

Item Value
gene id G1686593
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 33073327 ~ 33073570 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1929138
ggtactttgctgcaggagggactggtgcacttcacaaaatagatggcatcatgaggacggaaaattatgaggttatattgaagcaacatctcaagaaatcagtcaggaagttaaagcttgttcgcaaatgggtcttccaaatggacaatgacaccaagcatacttccaaagttgtgtcaaaatggcttaaggacaacaaagtcaaggtattggagtgtccagcacaaagctctgacctcaatcc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1929138 True 244 lncRNA 0.43 1 33073327 33073570

Neighbor

gene id symbol gene type direction distance location
LOC110499344 LOC106589763 coding upstream 209938 32849697 ~ 32863389 (+)
LOC110499341 LOC106589760 coding upstream 313280 32747591 ~ 32760047 (+)
LOC110499338 LOC106589757 coding upstream 336597 32702791 ~ 32736730 (+)
LOC110499339 LOC106589759 coding upstream 370802 32690087 ~ 32702525 (+)
LOC110499531 NA coding upstream 459394 32612958 ~ 32613933 (+)
LOC118942060 LOC106589768 coding downstream 111494 33177293 ~ 33196167 (+)
LOC110499352 LOC106589767 coding downstream 142702 33216272 ~ 33262134 (+)
LOC110499354 NA coding downstream 401370 33474940 ~ 33517443 (+)
LOC118942063 NA coding downstream 455228 33528620 ~ 33530380 (+)
LOC110499362 LOC106589783 coding downstream 587751 33661321 ~ 33787514 (+)
G1686563 NA non-coding upstream 15240 32954289 ~ 33058087 (+)
G1686579 NA non-coding upstream 57115 33009409 ~ 33016212 (+)
G1686567 NA non-coding upstream 80209 32982067 ~ 32993118 (+)
G1686566 NA non-coding upstream 107791 32960859 ~ 32965536 (+)
G1686571 NA non-coding upstream 110381 32961782 ~ 32962946 (+)
G1686594 NA non-coding downstream 838 33074408 ~ 33074618 (+)
G1686597 NA non-coding downstream 3963 33077533 ~ 33077836 (+)
G1686607 NA non-coding downstream 25942 33099512 ~ 33099734 (+)
G1686616 NA non-coding downstream 49257 33122827 ~ 33123160 (+)
G1686547 NA non-coding downstream 59817 33133387 ~ 33133853 (+)
G1686317 LOC106589755 other upstream 411679 32654354 ~ 32661648 (+)
LOC110499316 LOC106589729 other upstream 3496769 29572397 ~ 29588171 (+)
lhcgr lhr other upstream 3615406 29437357 ~ 29458499 (+)
G1681792 NA other upstream 4294918 28778006 ~ 28778409 (+)
G1681180 NA other upstream 4346832 28717361 ~ 28726495 (+)
G1687675 NA other downstream 1252267 34325837 ~ 34326254 (+)
LOC110499396 LOC106589821 other downstream 2308139 35381609 ~ 35384567 (+)
G1689347 NA other downstream 2607797 35681367 ~ 35682437 (+)
LOC118942012 LOC106589797 other downstream 2627650 35701200 ~ 35702156 (+)

Expression


Co-expression Network